Pairwise Alignments

Query, 508 a.a., cell wall degradation protein from Pseudomonas fluorescens FW300-N2E2

Subject, 502 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  185 bits (470), Expect = 3e-51
 Identities = 119/351 (33%), Positives = 177/351 (50%), Gaps = 18/351 (5%)

Query: 170 LYARLRQQPLAEWQAVPGGPLLQPDKQDARVPALAQRLFNEGYLSTP----PQLSDEH-- 223
           LY  ++ + L  W+ +     L P +Q   +  +A+RL   G+L       P +  E   
Sbjct: 144 LYQLMQLEDLTSWELLTLEEKLSPGQQSPLISPIARRLLILGFLPNELRMEPSVGVEANN 203

Query: 224 ---YSPMLVEAMKSFQAQHSLQADGVVGPWTVTELNISPAMRREQLRINLERMRWLAQDV 280
              Y   LV A+K FQ QH L ADGV+G  T+  LN SP  R + L  N+ R       +
Sbjct: 204 GMLYGDELVTAIKLFQQQHGLLADGVIGKQTLFWLNQSPRARAKLLARNVLRQSIFTAQL 263

Query: 281 EADSVLVNVAAAQLTVYQGGAPVWQTRTQVGRAQRQTPLLKSHVTRLTLNPTWTIPPTIM 340
            A  +LVN+ A +L + + G    +++  VG+A R TPLL S ++ + +NP W +P TI+
Sbjct: 264 PARYLLVNIPAFELKLIEDGQVALRSKVIVGKASRPTPLLASQISSVVMNPEWRVPRTII 323

Query: 341 REDKLPEIRRDPEFLSRHNLRILDGDGLPLLAEDIDWEHPGN----LMLRQDPGPKNPLG 396
           + D LP IR+D  +L+     +   DG        +W+   +      L Q PGPKN LG
Sbjct: 324 KRDILPHIRQDGHYLTEREFDVYAYDGQQAEHSADEWQALASSHFPYQLVQRPGPKNALG 383

Query: 397 KMAIRFPNPFSVYLHDTPSQALFSKGPRAFSSGCVRIEQVMRL----RDLLVSPAERART 452
           +    F N FSVYLH T   +LF +  RA SSGC+R+E+V  L    +  LV   +R   
Sbjct: 384 RYKFHFDNSFSVYLHGTSEPSLFKRTNRALSSGCIRVEKVEELALWFKTHLVKD-QRLWD 442

Query: 453 ETLLASESTHEFRLARPVPILLGYWTAQADSQGQAVYVPDIYGRDATLSAA 503
           +    +  +  F L+  +P+ + YWT   D  GQ  Y  DIY +++ LS A
Sbjct: 443 KLHTDTTQSQWFALSDKLPVFVVYWTVWLDDAGQVQYRNDIYQQESELSHA 493