Pairwise Alignments

Query, 278 a.a., L-rhamnose operon transcriptional activator RhaR from Pseudomonas fluorescens FW300-N2E2

Subject, 278 a.a., AraC family transcriptional regulator from Pseudomonas aeruginosa PA14

 Score =  373 bits (958), Expect = e-108
 Identities = 176/278 (63%), Positives = 220/278 (79%)

Query: 1   MTARNWIDLKQDATSGIETVRAHFEGHAYDPHWHDTYLVGVTEQGVQQFHCRRQQHNSTP 60
           M +R+WIDL +DA +GIET+RAHFEGHAYDPHWHD+YL+G TE GVQQF+CRR++H+ST 
Sbjct: 1   MGSRDWIDLARDAETGIETLRAHFEGHAYDPHWHDSYLIGYTEIGVQQFNCRRRRHDSTA 60

Query: 61  GKVFLLEPGELHDGNAPHDHGFTYRTLYLEPQWLERELRSLFDVAPDNAQLGFAATLTDD 120
           G+VFL+EPGE+HDG AP   GFTY  LYL+P WL RELR+ FD AP +   GF A LT+D
Sbjct: 61  GQVFLVEPGEIHDGRAPIAGGFTYSMLYLQPDWLRRELRATFDDAPSDRDPGFHANLTED 120

Query: 121 ARLASATAMAFQSLHEQEIRIVRQTALDTLLANLTQHLHWRARINPDPRLPLVAQQARDY 180
            RL  A A AF+ LH +E+R++RQTAL+ +L  L  HL WR     DPRLPLVAQ+ARDY
Sbjct: 121 PRLTLAIAQAFRVLHGRELRLLRQTALELVLERLRVHLGWREAKPFDPRLPLVAQKARDY 180

Query: 181 LHSHLSEDIGLDDLAQVAGVDRFRLTRAFKAAFGLAPHAYLIQLRLARARRLLARGESAV 240
           LH+H  +DIGLD+LA   G DRFRL RAFKAA+GL P+AYL+QLRLA+AR++LA G    
Sbjct: 181 LHAHFYQDIGLDELASACGTDRFRLNRAFKAAYGLPPYAYLVQLRLAKARQMLAVGGQPA 240

Query: 241 AVAAMLGFADQSHLGRWFQRAYRLSPADYRKRCSIVPD 278
            +A+ LGFADQSHLGRWF+RAY ++PA YR++C+ +PD
Sbjct: 241 DLASALGFADQSHLGRWFRRAYGMTPAAYRRQCTQLPD 278