Pairwise Alignments

Query, 237 a.a., Transcriptional regulator for ferulate or vanillate catabolism from Pseudomonas fluorescens FW300-N2E2

Subject, 238 a.a., transcriptional regulator. GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 78.6 bits (192), Expect = 1e-19
 Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 20/232 (8%)

Query: 8   VLVALRKMIASGELAAGERLMEIPTAELFGVSRMPVRMAFRTLEQEGLLVRFGGRGFQVR 67
           +LV ++  I  GEL AG ++ E   AE +G+SR P R A +TLE++ L+VR    G +V 
Sbjct: 20  ILVQIQTSIIKGELPAGSKINEQALAEKYGISRGPTREALQTLERQRLVVRAPHVGARVA 79

Query: 68  SVSAEQIAGAVEVRGVLEGLAARQTAEHGLSEEARAILEQCLAQGDELFAKGYVTEDDLE 127
            ++  ++    ++R VLEG+A    A   ++ E  A LE  LA  +   A G     D  
Sbjct: 80  QLTVSELNDLYQLRSVLEGMACELAASR-ITPEQLAKLEDLLAVQETALANG-----DTY 133

Query: 128 VYHDLNMRFHQVIVEGSHNPAIADALARN-DHLPFASVTALAVDRQNMAGEFRRFNYAHM 186
              + ++ FH  I++ S N  + + L     HL       L + R     + R    A  
Sbjct: 134 FQEEGDVDFHYQIIQASGNKHLQETLIGGLYHL-------LRMYRYQCTNKNRPVK-AIA 185

Query: 187 QHHSVFDALINRQSGRAEAIMREH-----ANATLRYAEVFGSTLADERMTVI 233
           +H  + +A+  R    A  +MR H      N  LR  E+  +  A E +  I
Sbjct: 186 EHRRIVEAIAQRDGELASLLMRRHIEQGRKNTELRLIELQANAAAKETLANI 237