Pairwise Alignments

Query, 485 a.a., Inositol transport system ATP-binding protein from Pseudomonas fluorescens FW300-N2E2

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  361 bits (927), Expect = e-104
 Identities = 203/470 (43%), Positives = 299/470 (63%), Gaps = 17/470 (3%)

Query: 1   LLGENGAGKSTILKILAGAQPADAGQGSLEFNGHVLGEHDTPIRRQEVGIITIYQEFNLI 60
           L+GENGAGKST++K+L G    DAG  S+E+ G  +     P   Q  GI  I+QE NLI
Sbjct: 36  LMGENGAGKSTLMKVLTGIYSKDAG--SIEYQGQPVS-FKGPRDSQLAGISIIHQELNLI 92

Query: 61  ADMSVAENMYLGREPLR-HGFVDWKQMFSDAQHVLDDLGLHITPRTMVRKLSVAEQQMVE 119
             +++AEN++LGRE     G + W +M   A  +L  L +  + +T++ +LS+ EQQMVE
Sbjct: 93  PQLTIAENIFLGREMTSPFGRILWDEMHRKADQLLARLNVKHSAKTLLGELSLGEQQMVE 152

Query: 120 IAKALTMNAKLIIMDEPTAALSGREVDKLHEIITDLKAKGISIIYVSHKLNEVKACCDRY 179
           IAKAL+  +K+IIMDEPT AL+  E + L  +I +L+ +G  I+Y+SH+L E+   CD  
Sbjct: 153 IAKALSFESKVIIMDEPTDALTDTETESLFNVINELREQGCGIVYISHRLKEIFEICDDI 212

Query: 180 TIFRDGAYITSGDVCDVSVDDIVRLMVGRDVEFVRKPLTGAPGEVMLKVQSVSRTAAGGG 239
           T+ RDG +I    VCD + D ++ +MVGR +E     +    G++ L+V  ++      G
Sbjct: 213 TVLRDGKFIGECRVCDTNEDGLIEMMVGRKLEEQYPRIAAQQGDISLEVIGLT------G 266

Query: 240 RSLHATPLLDMSVDVRAGEIVGFAGLVGAGRTELARVIFGADGCDEGMIYVNGRQVSPFK 299
             +H     D+S  ++ GEI+G +GL+GAGRTEL +VI+GA   + G+I +NGR V+P  
Sbjct: 267 SGVH-----DVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLNGRTVNPV- 320

Query: 300 SPREGIAAGVALVPEDRKQQACFLSHSIRWNMSLPSLGGLQRWGMFIDDRAETQLIQDYQ 359
           SP++G+A G+A + EDRK     L  S++ NMSL +L  L + G+ I    E   + D+ 
Sbjct: 321 SPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLSK-GVQIRHADEVIAVDDFI 379

Query: 360 KRLRIKMSNDSVAIGTLSGGNQQKVILARCMALKPKVLIVDEPTRGIDVGAKAEVHQLLF 419
           +   IK  +    IG LSGGNQQKV +A+ +  KPKVLI+DEPTRG+DVGAK E++QL+ 
Sbjct: 380 RLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAKKEIYQLIN 439

Query: 420 DMARAGVAVIVISSELPEVMAVSDRIVTFREGQITGIVSADEATEELLMA 469
                G+++I++SSE+PEV+ +SDRI+   EG+I+G   A EA +E LMA
Sbjct: 440 QFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMA 489



 Score = 83.2 bits (204), Expect = 2e-20
 Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 9/222 (4%)

Query: 251 SVDVRAGEIVGFAGLVGAGRTELARVIFGADGCDEGMIYVNGRQVSPFKSPREGIAAGVA 310
           S++V  G ++   G  GAG++ L +V+ G    D G I   G+ VS FK PR+   AG++
Sbjct: 25  SLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEYQGQPVS-FKGPRDSQLAGIS 83

Query: 311 LVPEDRKQ-QACFLSHSIRWNMSLPSLGGLQRWGMFIDDRAETQLIQDYQKRLRIKMSND 369
           ++ ++        ++ +I     + S  G   W      R   QL+     RL +K S  
Sbjct: 84  IIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEM--HRKADQLLA----RLNVKHSAK 137

Query: 370 SVAIGTLSGGNQQKVILARCMALKPKVLIVDEPTRGIDVGAKAEVHQLLFDMARAGVAVI 429
           ++ +G LS G QQ V +A+ ++ + KV+I+DEPT  +       +  ++ ++   G  ++
Sbjct: 138 TL-LGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFNVINELREQGCGIV 196

Query: 430 VISSELPEVMAVSDRIVTFREGQITGIVSADEATEELLMARM 471
            IS  L E+  + D I   R+G+  G     +  E+ L+  M
Sbjct: 197 YISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMM 238



 Score = 71.6 bits (174), Expect = 6e-17
 Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 21/219 (9%)

Query: 3   GENGAGKSTILKILAGAQPADAGQGSLEFNGHVLGEHDTPIRRQEV---GIITIYQEFN- 58
           G  GAG++ ++K++ GA P++  +G +  NG  +     P+  Q+    GI  I ++   
Sbjct: 286 GLMGAGRTELMKVIYGALPSE--RGVINLNGRTVN----PVSPQDGLANGIAYISEDRKG 339

Query: 59  --LIADMSVAENMYL-GREPLRHGFVDWKQMFSDAQHVLDDLGLHITPRTMVRK-----L 110
             L+  +SV ENM L   + L  G    +   +D    +DD       +T  R+     L
Sbjct: 340 DGLVLGLSVKENMSLCALDQLSKGV---QIRHADEVIAVDDFIRLFNIKTPSREQIIGNL 396

Query: 111 SVAEQQMVEIAKALTMNAKLIIMDEPTAALSGREVDKLHEIITDLKAKGISIIYVSHKLN 170
           S   QQ V IAK L    K++I+DEPT  +      +++++I   KA+G+SII VS ++ 
Sbjct: 397 SGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMP 456

Query: 171 EVKACCDRYTIFRDGAYITSGDVCDVSVDDIVRLMVGRD 209
           EV    DR  +  +G         +   + ++   VGR+
Sbjct: 457 EVLGMSDRILVMHEGRISGEFMASEADQEKLMACAVGRN 495