Pairwise Alignments

Query, 280 a.a., sugar ABC transporter permease from Pseudomonas fluorescens FW300-N2C3

Subject, 283 a.a., binding protein-dependent transport system, inner membrane component from Phaeobacter inhibens DSM 17395

 Score =  168 bits (425), Expect = 1e-46
 Identities = 95/272 (34%), Positives = 148/272 (54%), Gaps = 4/272 (1%)

Query: 11  LRLGFWCLIAILLVYAVFPFYYAIVTSLKPSSALFQVSYWI--DQPDFSNYAAVLNQASF 68
           L  G +  IA  L +A+FP Y+ +  ++ P + +F     +      F N+A VL +  F
Sbjct: 14  LAFGKYAAIAFYLGFALFPLYWLMKIAITPDALIFSEGTRMLPSAVTFENFATVLFETEF 73

Query: 69  LRAIGNSLVVALCVVALALFLSLTAAYALGRVKFRGRGPVLMMVLGVSMFPQVAVLSGLF 128
           L    NSL V+L        ++  A YA  R  F G+  ++ ++L   MFP + +++ ++
Sbjct: 74  LAYFRNSLTVSLGTAFFTTLIAAGAGYAFSRFVFAGKRIIIAVMLITQMFPLLMIIAPIY 133

Query: 129 EVIRALGLYNTSWALILSYTIFTLPFTVWVLTTFMGQLPHELEEAAIMDGASPWVTLTRV 188
           +++  LGL N+  +LI+ YT F +PF  +++ +F   +P +LEEAA+MDG S +  L  V
Sbjct: 134 KIVADLGLLNSLTSLIVVYTAFNIPFATFLMQSFFDGIPKDLEEAAMMDGCSRFQALRTV 193

Query: 189 LLPLLWPALVTTGLLAFIAAWNEFLFALTFTLTDSQRTVPVAIALISGGSPHELPWGLLM 248
           + PL  P L  T    F AAW+E LFAL     +   T PV   L++  S   + WG +M
Sbjct: 194 VFPLTLPGLGATLGFVFTAAWSELLFALMLISKNDAMTFPV--GLLTFVSKFSVDWGQMM 251

Query: 249 AASVLVTVPLVILVLIFQRRIVSGLTAGALKG 280
           AA VL  VP  +  +  QR +V GLT+GA+KG
Sbjct: 252 AAGVLALVPSCLFFIFIQRYLVQGLTSGAVKG 283