Pairwise Alignments

Query, 842 a.a., TonB-dependent receptor from Pseudomonas fluorescens FW300-N2C3

Subject, 976 a.a., TonB-dependent receptor (RefSeq) from Shewanella amazonensis SB2B

 Score =  132 bits (331), Expect = 1e-34
 Identities = 128/497 (25%), Positives = 208/497 (41%), Gaps = 78/497 (15%)

Query: 413 RLDLARDYDFSGSASQVKFGGKVSRRDKDNDLDAWVYEDFDDLGFTDEQLNLGQFQKGTV 472
           RLD   D D S   S V+FG + S R   ND   + Y +      T   L L Q     V
Sbjct: 486 RLDFKYDLD-SDWLSSVEFGVRWSDRTYSNDRSVFEYGNDGGFSSTQPPLRLTQDMVTVV 544

Query: 473 DYR--LGRFGPGISADAIKQLLGGL------------NRDEFFDEQESRVN-------DF 511
           D+      F   ++ D  K L                N D   D      N         
Sbjct: 545 DWSGDFSYFPSYLAIDLDKALNAWFPEGIPQPVQTWGNADGVLDPMGYTTNYSWSVLQSG 604

Query: 512 KMSEDINAAYLMNTVDIDDWRF----------------------IAGMRYEGTEFEAKGS 549
           ++ E + A+YLM  +D +                          + G   +G ++    +
Sbjct: 605 EVYEKVLASYLMFNIDTEIGGLPLTGNIGLRVVDTDQSATMLQNVGGDPAQGAQYIVDEN 664

Query: 550 GATDGVFTDTETRRKYHHWLPGLHARYQLDKNTQVRAAWTKSVVRPTFGQLA---PGFVI 606
           G  + ++  T     Y  +LP ++   +L  ++Q+R A  K + RP   +LA      V 
Sbjct: 665 GIVNDLYAPTVVGTTYTDYLPSMNLSLKLTDDSQLRFAAAKVMARPPINRLAGDVSASVN 724

Query: 607 DDDE---ATFGNPELKPLESSNLDLGIEHFMGHAGTVSAFVFYKDIKHFVYNT-----DL 658
           DD E   ++  NP L P  ++  DL  E++      V+A +FYKDI  F+        D 
Sbjct: 725 DDGEINGSSTNNPFLMPFYATQYDLSYEYYFEEGALVAA-LFYKDIDSFIDTVAIDDFDF 783

Query: 659 AGTG----------------AWTDFSEAHSYANGDSAKLYGLELAYSQKFDWLPAPWNGL 702
            G G                  T+ +   +  N +   + GLELAY+Q F  LP+P++GL
Sbjct: 784 RGHGFNVPDYIVDPVSGEQIETTNGTYTTAVNNTEGGYIRGLELAYTQVFASLPSPFDGL 843

Query: 703 LLGANTTFSRSDAEIEGFDQASGTQRKRSIDLPNQSDTVGNLMLGWENDKLSLRLSANYK 762
             G NT++S +D+E++      G    ++++    S  V NL L +  +    R+SA Y+
Sbjct: 844 --GVNTSYSYTDSEVQKLTSLGGDSVPQTLE--GLSKHVANLTLFYGYEGFETRISARYR 899

Query: 763 SAYLFELASIGDRDHDLHVDAQTFVDFSARYSLTKNLQVSLEAQNLTDESYFVYTGHRSY 822
           S+++ E  +I  +   ++ DA+T +D+ A Y +  NL V  +  NLTDE    Y G  + 
Sbjct: 900 SSFVSEQVAINSQV--VNYDAETVIDYQASYQINDNLGVLFQVNNLTDEPTKSYFGTEAK 957

Query: 823 NGQYEEYGPTYKLGLTF 839
            G  + +G  + LG+T+
Sbjct: 958 TGTLQYFGRQFFLGVTY 974



 Score = 77.8 bits (190), Expect = 3e-18
 Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 15/185 (8%)

Query: 38  EHVEVVGQAASIDQALKEQRSADSIKSVVHADGVAQLPDENVAEAVQRLPGVSVERDQGE 97
           E +EV G   S+  +L  +R  D++   + AD +  LPD ++A+A+ RLPG+S  R  G+
Sbjct: 60  ERIEVTGYRRSLIDSLNAKRFGDTVSEQLSADDLGALPDVSMADALTRLPGISAVRTGGQ 119

Query: 98  GRFVSVRGLGPDLNSVTINGTLVPAPESERRAVALDVLPSELVQSLSVIKTLTPDMDANS 157
              +++RG+       T+NG       S  R++  D  PSEL+ S +V K+    +    
Sbjct: 120 AAEINIRGMSGGFVFSTLNGR-EQVSTSGSRSIEFDQYPSELINSAAVYKSPKASLIEGG 178

Query: 158 LGGTVDVKSLSAFDHKGLFYTGSSEASYDKNTGQTSPKFSGAISDRFSLGDGIDNFGVAA 217
           L GTV++ +             +S  + DK    T     G  +DR S   G + FG   
Sbjct: 179 LAGTVELAT-------------ASPLAADKEHNVTL-NARGMYNDRASEVYGAEEFGHRL 224

Query: 218 ALSWQ 222
           + S+Q
Sbjct: 225 SFSYQ 229