Pairwise Alignments

Query, 842 a.a., TonB-dependent receptor from Pseudomonas fluorescens FW300-N2C3

Subject, 938 a.a., TonB-dependent receptor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  271 bits (693), Expect = 1e-76
 Identities = 219/838 (26%), Positives = 397/838 (47%), Gaps = 57/838 (6%)

Query: 38  EHVEVVGQAASIDQALKEQRSADSIKSVVHADGVAQLPDENVAEAVQRLPGVSVERDQGE 97
           + V V G      +A+  Q++   I +VV AD V + PD N+ +A++R+ G++V+ DQGE
Sbjct: 116 QEVVVGGAFQGQRRAINSQKNNLGITNVVSADQVGKFPDSNIGDALKRINGINVQYDQGE 175

Query: 98  GRFVSVRGLGPDLNSVTINGTLVPAPESERRAVALDVLPSELVQSLSVIKTLTPDMDANS 157
            RF  VRG   DL+SVTING  +P+ E + R V LD++P+++VQ++ V K +T DMD ++
Sbjct: 176 ARFGQVRGTSADLSSVTINGNRLPSAEGDTRNVQLDLIPADMVQTIEVNKVVTSDMDGDA 235

Query: 158 LGGTVDVKSLSAFDHKGLFYTGSSEASYDKNTGQTSPKFSGAISDRFSLGDGI--DNFGV 215
           +GG++++ + S   +K +F       S    TG         ++  F+ GD    D  G+
Sbjct: 236 IGGSINLVTKST-PYKRMF-------SATAGTGYNWISQKAQLNLGFTYGDRFFNDKLGM 287

Query: 216 AAALSWQKRDFGSDNVETGGAWDFAQGSRLEEFEQRDYDIRRERAGGGLNFDYKPDDFSS 275
            AA+S+Q    GSD+VE     +      + E ++R Y + RER    L FDY  +    
Sbjct: 288 MAAISYQNAPSGSDDVEFEYDVNKKGEVVMVEAQKRQYYVTRERQSYSLAFDYDINPNHR 347

Query: 276 YYLRTLYSRYKDSETRNAASIAFENPQAAGQLGDAEGERKLK----------QREETQEI 325
             L+ +Y+R  D E R   +    +       GD +   +++           R E Q+ 
Sbjct: 348 LTLQGIYNRRHDWENRYRVTYKDLDKTGLDDEGDMQQSAQIETKGGTPDNRNARLELQQT 407

Query: 326 QSYVLGGERLFGLWTLSGQGGYSQSSEDSPGHIAGATFEGIDGFNSGFYDNDKPRPIIGS 385
               L GE  FG  +++    Y+++SED P     +  +   GF      +  P      
Sbjct: 408 MDLSLSGEHQFGKLSVNWGASYARASEDRPNERYFSLKQDFLGFTVVDAGDRFPYVTTDV 467

Query: 386 GFYDPANFSLDKVDWEAQKTTDT-----EKNLRLDLARDYDFSGS--ASQVKFGGKVSRR 438
             ++      ++  W+ ++ T++     EK+L+  +  +   +     + ++FG K + +
Sbjct: 468 SLHN-GEADGERGKWKVKELTESNQEIYEKDLKFKVDFELPLTNGIYGNSLRFGAKYASK 526

Query: 439 DKDNDLDAWVYEDFDDLGFTDEQLN--LGQFQKGTVDYRLG-RFGPGISADAIKQLLGGL 495
            KD +   + Y D     F  + +N    Q + G   Y  G ++ P  +    K+ LG L
Sbjct: 527 TKDRNTLCYDYADTYKDTFDKDYMNNLTSQIRDG---YMPGDQYKP--TDFVSKEYLGSL 581

Query: 496 NRDEFFDEQ--ESRVNDFKMSEDINAAYLMNTVDI-DDWRFIAGMRYEGTEFEAKG---S 549
           +      EQ  E    ++   E++ +A+     ++    + +AG+R E T  +  G   +
Sbjct: 582 DLSSMEGEQVLEESSGNYHARENVTSAFFRFDQNLGKKIKMMAGLRMEATHIKYNGWNWN 641

Query: 550 GATDGVFTDT-----ETRRKYHHWLPGLHARYQLDKNTQVRAAWTKSVVRPTFGQLAPGF 604
            A D   T+T       +  Y +WLP L  +Y ++ + ++RA++T+++ RP +  L P  
Sbjct: 642 VADDKDETETLEPTGNHKNSYVNWLPSLLFKYDVNDDLKLRASFTETLSRPKYSALIPCV 701

Query: 605 VID--DDEATFGNPELKPLESSNLDLGIEHFMGHAGTVSAFVFYKDIKHFVYNTDLAG-T 661
            I+  D+E   GN +L P  S NLDL  +++    G +SA +FYK I  F+ +  +   T
Sbjct: 702 NINRSDNELVMGNSDLTPTISYNLDLSADYYFKSVGLISAGIFYKKINDFIVDQVIGDYT 761

Query: 662 GAWTDFSEAHSYANGDSAKLYGLELAYSQKFDWLPAPWNGLLLGANTTFSRSDAEIEGFD 721
               ++ +     N   A L G+ELAY + F ++        +G   T++ +  ++  F+
Sbjct: 762 YQNNEYKKFTQPKNAGDADLLGVELAYQRDFGFIAPALK--CIGFYGTYTYTHTQVNNFN 819

Query: 722 QASGTQRKRSIDLPNQSDTVGNLMLGWENDKLSLRLSANYKSAYLFELASIGDRDHDLHV 781
              G + ++ + LP   +   N  L +E    ++R S NY S+++ E+  +   D   + 
Sbjct: 820 -FEGRENEKDLSLPGSPEHTANASLYFEKKGFNVRFSYNYASSFIDEMGEVAALDR--YY 876

Query: 782 DAQTFVDFSARYSLTKNLQVSL--EAQNLTDESYFVYTGHRSYNGQYEEYGPTYKLGL 837
           DA +++D +A Y+  K ++ +   +A NL ++    Y G +    Q E YG     G+
Sbjct: 877 DAVSYMDLNASYTFGKKIKTTFYADATNLLNQPLRYYQGTKDRTMQAEYYGVKINAGV 934