Pairwise Alignments

Query, 599 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2C3

Subject, 598 a.a., nitrate/nitrite sensor protein NarQ (RefSeq) from Shewanella sp. ANA-3

 Score =  206 bits (525), Expect = 2e-57
 Identities = 164/572 (28%), Positives = 280/572 (48%), Gaps = 30/572 (5%)

Query: 6   RSSLPARA-GLAVILIAILALASSLSAGLIAWFSQGDAAAINTAGSVRMETYHLSWKLAA 64
           R SL ++  GL ++LI +L+ + ++ A +   +S GDA AIN +GS+RM++Y L +   +
Sbjct: 3   RGSLTSKILGLMLVLI-LLSSSLAIFAIINLSYSLGDAKAINASGSLRMQSYRLMFYANS 61

Query: 65  GANDDIPAIIDSLQQRLDSPALRAVLEDGPETSLHKSYRDLIQRWNQTLRPAIERGDSAF 124
           G+ D     I   +  L S AL+          +   Y+ +I +W   ++  IE+ +S  
Sbjct: 62  GS-DAAQEKIAEFENTLHSEALQPSTGWLSPKKIADQYQLVIDKW-LVMKYYIEQENSRD 119

Query: 125 FQSSAPSFVEQLDQFVTLLQRQSEHKQGWQQTIQGMALFSTMIILLIGLYELQYGVVTPL 184
           + +S   FV+ +D  V  ++  +  K       Q   L   + I  + +   +  VV PL
Sbjct: 120 YAASLKDFVDTIDLLVLEMEHHAAFKLRLLAASQIFGLGLMLAIAFLAVRFTKRKVVVPL 179

Query: 185 QELVDATQRFRRGEFQVRVNHQSEDELGQLATSFNTMAETIEQSHRTLENQVQQKTLNLQ 244
           Q+L+++     +G F++ +      EL  L  +    A  +   +  LE+QV +KTL L 
Sbjct: 180 QQLMESANTISKGNFEIEMPETEYIELTALTHALQKTARELATLYGNLESQVAEKTLALT 239

Query: 245 QANAALELLYQSSRSLATRQANAEGLDELIRRFQ--QRLPGLRLTLCLQGQLQAPARHLL 302
           +AN  L  LY +  +L   + + + L   + + +  + +  LRL +      Q P + L 
Sbjct: 240 RANNELAFLYDNLLTLNANKLDYKALRAALNQLKDYESIDYLRLII------QYPEQEL- 292

Query: 303 ALHGAASRQVCASSDCASCHRHNAARPQAFSISNQGTELGELKAHFVDGHAAQPWETALI 362
                   +V  +         N+ R   F +  +  +LG L+       +AQ   T L 
Sbjct: 293 --------EVVEADGGWPEDTQNSTR---FPLQFEQADLGYLELI-----SAQDTNTPLF 336

Query: 363 QALANLIGTSLSLKRQREQDHRLLLLDERTIIARELHDSLAQALSYMKLQVSRMQTLMRR 422
           +  A ++  S+ +    EQ  +L L++ER +IARELHDSL Q LS++K+Q+S ++  +  
Sbjct: 337 KNFAIMLTRSIVIHNATEQRQQLALMEERGVIARELHDSLGQVLSFLKIQISLLRKNLDH 396

Query: 423 GEPVQTLETVTGELREGLNNAYRQLRELLTTFRLQIHDDGLVEELKDTAEEFSNRGDFQV 482
                 +E    E+ EG++ AY QLRELL+TFRL I +  L   ++   E+     D ++
Sbjct: 397 SCRSPAIEGQLTEINEGVSTAYVQLRELLSTFRLTIKEPNLKNAMEAMLEQLRANTDIKI 456

Query: 483 HLFVDTLAFELSASEQIHILQITREALSNCLRHAHAENAWLE-LRQEGETVRLSIEDDGR 541
           HL        L A + IHILQITREA  N ++HA+A    +   + +   V +S+ D+G 
Sbjct: 457 HLDYKLSPQWLEAKQHIHILQITREATLNAIKHANASQINIRCYKDDNGMVNISVSDNGI 516

Query: 542 GFSGEVDQREHHGLNIMNERARSLHGQLQIHS 573
           G     ++ +H G+ IM+ERA  L G +   S
Sbjct: 517 GIGYLKERDQHFGIGIMHERASKLAGTVVFSS 548