Pairwise Alignments

Query, 596 a.a., type VI secretion system protein ImpG from Pseudomonas fluorescens FW300-N2C3

Subject, 589 a.a., type VI secretion system baseplate subunit TssF from Vibrio cholerae E7946 ATCC 55056

 Score =  228 bits (580), Expect = 7e-64
 Identities = 193/613 (31%), Positives = 299/613 (48%), Gaps = 58/613 (9%)

Query: 12  YYQRELTWLRHAGSLFAERYPKVARRLELSPGECPDPHVERLLEGFALLAARLQRRLDDD 71
           Y++ EL +L+  G  F E +P+++R L    G   DP VERLLEGFA L ARL+ +++D+
Sbjct: 6   YFREELAFLKEQGKEFTEIHPQLSRFLH---GRTTDPDVERLLEGFAFLTARLREKVEDE 62

Query: 72  YAEFSDALLEQLYPLAMRPLPSCAIVQFEPDPSKGNLNEGYPLPRDTPLFVTTDTGQSIH 131
           + E + +++  L+P  +RP+PS ++V FEPD S   ++E   +PR+T L      G + H
Sbjct: 63  FPELTHSIINMLWPNYLRPIPSMSVVAFEPDKS---VSEKQVIPRNTQLDSKPVFGTACH 119

Query: 132 FRTTAAVHLWPVHVSEALLLGSDETQALTGVVQARSALRLELRCLGESQWSTLGIDSLRV 191
           F T   V L+P+       + ++ T+  T        +++ LR LG+       +D++R 
Sbjct: 120 FNTCRDVALYPMQCQG---VHAEHTREAT-------TIQISLRMLGDMTVGDAKLDTVRF 169

Query: 192 HLAASPMINAGLYDLLGAHAIKVLAGAPGSVPEPLAGLPQIVGFASDQVLLPDEDGVHPG 251
           +L      +  LY  L  +  K+     G      A     VGF+SDQ LLP    V+ G
Sbjct: 170 YLGGDKYSSQTLYLWLHHYLQKMTIEVQGVEFALPADAFSTVGFSSDQALLPYPKNVYDG 229

Query: 252 MRLLAEYFAFPDKFGFFDL-----PLAGATSDSQALYLYIVFDRAPSSRLPLQASDIALG 306
            R+L EY +FP+ F FFD+      L  A S    L ++  F +   +   ++  +  L 
Sbjct: 230 YRILQEYLSFPEAFHFFDVKGFAKALPKAVSGDFTLRIH--FSKTLPADTRVRQDNFQLY 287

Query: 307 CTPVINLFPRTSEPLRPDGTRSEYRLVADSHRENSVEIHSIRGM-----RAISGQGVRKV 361
           CTPVINLF   ++P+   G RSEYR+V  S      EI S+  +         G+ +R  
Sbjct: 288 CTPVINLFEHDADPIDLTGRRSEYRIVPSSRYPAHYEIFSVDQVVGWQDTQSEGKRIRGE 347

Query: 362 PAYYGS----QHGSD-----QTCYWHARRVSGMSPNRLGTDLMVSLVDTRFDPLVDTR-D 411
              Y S    QH  +     Q  Y+  R    +  +  G D  +S V  R D  +    D
Sbjct: 348 KRIYSSFESFQHEVERVRHRQALYYRTRVKESIRGD--GFDSFISFV--RGDETLSMGVD 403

Query: 412 YSLTAELLCTNRHLAQSLPAG-TPLGFERPGPVAWARLRNPPSPQSLPRLDGESRWRLVS 470
            +++ +L CTNR L   L  G   +  +   P A  +    PS    P LDG   W L+S
Sbjct: 404 EAVSIKLTCTNRLLPLELGVGDICVATDSSPPFATFKNITVPSQSLRPVLDGSLLWTLIS 463

Query: 471 QLTLNHLSLVEGPQALDALREILELHNLRDEASAHRQIEGVTGLGCERVIAHVGEDAWRG 530
            L+LN+LSL+    + DAL  +L  ++ R  A   RQ E V  +  + ++    +   + 
Sbjct: 464 NLSLNYLSLL----SKDALSCVLRAYDFR--ALVDRQAERVARMRLDGIVKIESKPVDKI 517

Query: 531 WR----NGLEVRLHLDPQHFVGSSA--VLFSGVLAQFFSLYATANRFVRTVLVQ-SDKEV 583
            R     GL+  L++D   F GS     LF  VL+ FF+LYA+ N F   V+V  S++E 
Sbjct: 518 LRGLPVRGLQSTLYVDQAGF-GSEGDLFLFGTVLSHFFALYASINSFHELVVVNISNQEK 576

Query: 584 KTWQPQAG-KPLV 595
            +W  Q+G +PL+
Sbjct: 577 YSWGTQSGMQPLI 589