Pairwise Alignments

Query, 424 a.a., Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data) from Pseudomonas fluorescens FW300-N2C3

Subject, 326 a.a., putative dihydropyrimidine dehydrogenase [NADP+] precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 73.2 bits (178), Expect = 1e-17
 Identities = 77/321 (23%), Positives = 129/321 (40%), Gaps = 23/321 (7%)

Query: 1   MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAVNVSS-R 59
           M DL   FAG+   NP  ++S+  T+ A    R  EAG G +V K+L E+   +     +
Sbjct: 1   MTDLKTTFAGLSLRNPIIISSSGLTNSAGKNKRLAEAGAGAIVLKSLFEEQIMLEADQLK 60

Query: 60  YSAHYGVNREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEES-WKR 118
             A Y    + L     E I +  L   L  I + KK+    ++ +   + C  +S W  
Sbjct: 61  DPAFYPEASDYLE----EYIREHKLAEYLTLIKESKKEC---SIPIIASINCYSDSEWVD 113

Query: 119 ILPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKLTP 178
               ++  GAD +E+N        +  +    G   +    + R  K   ++PVI+KL  
Sbjct: 114 FAKQIQEAGADALEINILA----LQSDVQYTYGSFEQRHIDILRHIKQTVTIPVIMKLGD 169

Query: 179 NITDIRVAARAAHRGGADAVSLINTINSITSVDLDRMVALPSVGSQSTHGGYCGSAVKPI 238
           N+T+        +  GA AV L N       ++++ M        Q +   +  SA    
Sbjct: 170 NLTNPVALIDQLYANGAAAVVLFNRFYQ-PDINIENM-------EQVSGEVFSTSADLAT 221

Query: 239 ALNMVAEIARDPQTQGLPICGIGGIGSWRDAAEFIALGSGAVQVCTAAMLHGFRIVDEMK 298
            L  +           +     GG+ +     + I  G+ AV+VC+A   +    + E  
Sbjct: 222 PLRWIG--IASSVVNKIDYAASGGVANPEAVVKAILAGASAVEVCSAIYQNTNAFIGEST 279

Query: 299 DGLSRWMDEHGHANLQAFSGR 319
             LS WM+  G  N+  F G+
Sbjct: 280 RFLSAWMERKGFKNIAQFKGK 300