Pairwise Alignments

Query, 347 a.a., AraC family transcriptional regulator from Pseudomonas fluorescens FW300-N2C3

Subject, 362 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas fluorescens FW300-N2E2

 Score =  124 bits (312), Expect = 3e-33
 Identities = 95/322 (29%), Positives = 156/322 (48%), Gaps = 18/322 (5%)

Query: 27  APIRVAFVLMDNFSMMSFTGAVDALVTANLMSDM--PLY-EVLTVGVSGGQVTSDLGIVI 83
           A + +  +L   F ++S +G  DAL  A    D   P+  +   +G  G +V S  G+ +
Sbjct: 39  AELSIGIMLWPRFPLLSLSGLTDALRHAADTGDQSRPIRCQWKVLGTPGQRVISSSGLDV 98

Query: 84  STDVELAQMPENQDVLIVAGGFRVKLQGHPLLRRKLRANAASGAI-LGGLWNGVFFVADA 142
             D EL   PE  D ++V GG    ++  P         AA+  + L GL  G F +A  
Sbjct: 99  PIDSELTD-PERFDYIVVIGGLLDFIEAVPKTYPAFLHQAAAAQVPLIGLCTGSFVLARH 157

Query: 143 NLLDGFECAVHPESRAMMVEVFPHVK-VSSRAYVVDRERVSCAGANSSLRMMLQLIRQTG 201
            L++G    VH          FP ++ V +R +++DR+R++CAG  S + + L LI    
Sbjct: 158 GLMEGRTACVHAYHGDDWKHRFPTLRFVINRDFLIDRDRITCAGGVSVIELALHLIGMHC 217

Query: 202 GAALVGAIEEILRCDESGDDATDLPPVFVETDPTLPES------LKLALELMWQNVEEPL 255
           G    G +   +   ++  ++      FV+    L  +      L  A+ LM +++  PL
Sbjct: 218 GPDRAGKVVHQMTVAKNTSNS------FVDRRKALGYASSSNRRLHEAVMLMEKHMAHPL 271

Query: 256 TIDELAACVKISKRQLERRFCSFLGATPTRYYLELRLTRARQLIQQTNRSVTEIAVATGF 315
            I+ +A  +  SKRQLER F +   ++P ++Y ++RL   R L+  ++R + EIA   GF
Sbjct: 272 DIEAIAHLLGTSKRQLERLFVAETNSSPAQFYRQVRLRFGRWLLVSSDRQIGEIAFECGF 331

Query: 316 VSSPHFQRRFRDFFGVPPGSYR 337
             +PHF R F+  FG+ PG  R
Sbjct: 332 ADAPHFIRHFQSMFGLSPGKLR 353