Pairwise Alignments

Query, 240 a.a., chemotaxis protein CheY from Pseudomonas fluorescens FW300-N2C3

Subject, 237 a.a., two component transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  222 bits (565), Expect = 6e-63
 Identities = 115/232 (49%), Positives = 160/232 (68%), Gaps = 2/232 (0%)

Query: 3   QEAWQVLIVEDDQRLAELTREYLESNGLRVAIEGDGAVAAARIIAEQPDLVVLDLMLPGE 62
           Q   +VL+VEDD RLA L  +YL+S+G+ V +E  G     R+I  +PD+++LD+MLPG 
Sbjct: 5   QSTHRVLLVEDDIRLANLIVDYLKSHGMHVEVERRGDTVLTRLINYKPDIILLDIMLPGM 64

Query: 63  DGLSICRKVREHYDGPILMLTARTDDTDQIQGLDLGADDYVCKPVRPRLLLARIQALLRR 122
           DGL++C K+ +++ GPIL+++A   + DQI+GL+LGADDYV KPV P LL+ARI  LLRR
Sbjct: 65  DGLTLCEKLPDYFAGPILLMSALGSNEDQIKGLELGADDYVVKPVDPALLIARINNLLRR 124

Query: 123 SEPEPSVAQKQRRLQFGPLVVDDALREAWLQGNGIELTSAEFDLLWLLVSNAGRILSREE 182
           +   P    +   L FG L +D   +   L    ++LTS EF+LLWLL S AG++LSR+ 
Sbjct: 125 TAKPPQA--ESHCLSFGKLSIDPHTQAIRLGDLEVDLTSHEFELLWLLASQAGQVLSRQY 182

Query: 183 IFTALRGIGYDGQDRSIDVRISRIRPKIGDDPDHPRLIKTIRSKGYLFVPEA 234
           I+  L  I +DG+DR IDVRISR+R K+GD+ + P  IKT+  +GYLF PEA
Sbjct: 183 IYQYLLNIDFDGKDRKIDVRISRLRKKLGDNIETPFRIKTVWGQGYLFAPEA 234