Pairwise Alignments

Query, 240 a.a., chemotaxis protein CheY from Pseudomonas fluorescens FW300-N2C3

Subject, 244 a.a., two component transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  225 bits (574), Expect = 5e-64
 Identities = 113/227 (49%), Positives = 161/227 (70%), Gaps = 2/227 (0%)

Query: 7   QVLIVEDDQRLAELTREYLESNGLRVAIEGDGAVAAARIIAEQPDLVVLDLMLPGEDGLS 66
           +V++VEDD+++++L   YL    +      DGA A A I+AEQPDLV+LDLMLP  DG S
Sbjct: 18  KVVLVEDDEKISQLLSSYLTMQQIETVCVHDGADAVATILAEQPDLVILDLMLPNLDGFS 77

Query: 67  ICRKVREHYDGPILMLTARTDDTDQIQGLDLGADDYVCKPVRPRLLLARIQALLRRSEPE 126
           ICR+++  +DG IL LTA  DD DQ+  L++GADD++ KP++PR+LLARI+ L+RR+  +
Sbjct: 78  ICRQLQPVFDGKILFLTASEDDMDQVAALEMGADDFIIKPIQPRVLLARIRMLMRRA--K 135

Query: 127 PSVAQKQRRLQFGPLVVDDALREAWLQGNGIELTSAEFDLLWLLVSNAGRILSREEIFTA 186
            S  Q+Q  L FG L ++   ++  L G  I LT++EFDLLWLL ++A  IL+RE +   
Sbjct: 136 VSAPQEQHHLSFGELELNQQRKQCLLAGEEISLTTSEFDLLWLLAAHADEILTREYLVKQ 195

Query: 187 LRGIGYDGQDRSIDVRISRIRPKIGDDPDHPRLIKTIRSKGYLFVPE 233
           +RGI YDG DR+ID +I  +R K+GD+P  PR I T+R++GYLFVP+
Sbjct: 196 IRGIEYDGIDRTIDNKIVVLRKKLGDNPALPRRIITVRARGYLFVPD 242