Pairwise Alignments

Query, 588 a.a., cytochrome C biogenesis protein CcmE from Pseudomonas fluorescens FW300-N2C3

Subject, 600 a.a., putative two-component sensor histidine kinase protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  296 bits (757), Expect = 2e-84
 Identities = 203/594 (34%), Positives = 312/594 (52%), Gaps = 20/594 (3%)

Query: 1   MLPTTRTLRLSLYTLLILAGAAVAATLAVRHAEREALKEDASRASQQLALYANSLHTLIE 60
           M  T +  R   YTLL L G      L      R  + + A  +  QL    + L  ++ 
Sbjct: 1   MQMTAQIHRRLRYTLLALVGLVGVLYLTWSWHVRSGVSDLADTSRAQLGELVSLLDGMLS 60

Query: 61  RYRALPAVLALDPELRSALKGPVSAAQQAALNRKLEQINGAAQSSTLELLDHSGLAVAAS 120
           R+  +P VL+ +P L   L       +   LN+ LE++    ++S + L+D  G+AVAAS
Sbjct: 61  RFETIPHVLSTNPMLADTLLNQRDMDKVHRLNKYLEELRHITEASDIYLIDALGVAVAAS 120

Query: 121 NWRLPSSYVGHNYGFRPYFIQTRTQGTGRFYAVGVTSGIPGYFLSSAVTGDNGEFLGAMV 180
           NW+   S+VG +Y FRPYF +      G +YAVG  S   GY+ S  V  D+G  LGA+V
Sbjct: 121 NWQQSYSFVGQDYSFRPYFTEAIAGRQGNYYAVGTASDKRGYYFSFPVE-DSGTVLGAIV 179

Query: 181 VKLEFPELERE----WRQGSDTLLVSDARGIIFIANRPGWRYRHLQPLTDSDRAELKATR 236
           VKL+  ++E +     + G    +++D   I+F +NR  WR   L P TDS R  L A++
Sbjct: 180 VKLDVLDIETQASGVAQAGQYDFIITDPDNIVFASNRAEWRLTSLGPFTDSKRYALNASK 239

Query: 237 QYDKQPLQAL-AHEPLRRFDDNSHLARVEAPDGSADYLWESLPLSAEGWTLHLLRRPQIA 295
           +Y K+ +  L  H   +   +  +  R+ +   +ADYL  S  +   GW +H+L      
Sbjct: 240 RYAKRQITELDIHPAYKGVTEGVNAYRIGSGLKAADYLDTSTAMIKAGWRVHVLTPLAPV 299

Query: 296 VEDLRNAGLAAAGLW-LALVFLLLFLNQRWRLAKLRQRSREELERLVEERTRDLRTA--- 351
              L    L +A  + L L+F LL   +R  LA++ Q+SR+ELE+ V+ERT +L  A   
Sbjct: 300 YSSLSQVLLLSATCYGLLLLFTLLQRERRHSLARM-QQSRDELEQRVKERTAELEAANTQ 358

Query: 352 ----QDGLVQSAKLAALGQMSAALAHEINQPLTAQRMQLATLRLLLDHGRVDDAYKALKP 407
               QD L+Q+AKL  +G MSA++ HE+NQPL A R      +  L+      A + L  
Sbjct: 359 LKDTQDELIQAAKLTVVGTMSASINHELNQPLAAIRSYTQNTQTFLERDMPGRARENLAI 418

Query: 408 VDDMLTRMAALTGHLKTFARKSPSGLRERLDLAAVVDQALQLLDTRLRDEQVSTVLHLTR 467
           + ++  R+A + G  K+F RKS  G    + LA  + QAL ++   L  ++    +H   
Sbjct: 419 ILELTDRLADIVGQFKSFTRKS-QGKDGVVMLANCLQQALTIVQPELDKQKAQLTIHCED 477

Query: 468 PAW-VRGDAIRLEQVLINLLRNALDAMAGQPLKRLEVRLEADDQLWRLTVSDSGTGIAEE 526
            +  V  D  RL+QVL+NL+ NAL+AM+  P+KRL + L   D +  + + DSG G+ + 
Sbjct: 478 ESLKVWCDGTRLQQVLVNLITNALNAMSQSPVKRLSISLLGGDPV-TIRIQDSGPGVRDS 536

Query: 527 HLGQVFDPFFTTKPVGDGLGLGLAVSFAIIHESGGRLSADN-HENGAVFCVTLP 579
            + ++F+P++TT     GLGLGL++S  II    G +   N  E GA+F +TLP
Sbjct: 537 LMEKIFEPYYTTSE-RQGLGLGLSISRRIIESMQGDIRVANAPEGGAIFDITLP 589