Pairwise Alignments

Query, 588 a.a., cytochrome C biogenesis protein CcmE from Pseudomonas fluorescens FW300-N2C3

Subject, 622 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  346 bits (888), Expect = 1e-99
 Identities = 227/603 (37%), Positives = 327/603 (54%), Gaps = 45/603 (7%)

Query: 11  SLYTLLILAGAAVAATLAVRHAEREALKEDASRASQQLALYANSLHTLIERYRALPAVLA 70
           +L   ++L+G  + A  A    ER  L E A RA+  L+L    L+  + RY  LPA++A
Sbjct: 18  ALAVAVLLSG--LVAVAAFPRIERYFLTEAAERAAATLSLTVEGLNGALRRYAPLPALVA 75

Query: 71  LDPELRSALKGPVSAAQQAALNRKLEQINGAAQSSTLELLDHSGLAVAASNWRLPSSYVG 130
             P+L + L+ P + A QA +N  L Q   A  +S + L+D SGL +AAS++R   S+VG
Sbjct: 76  ERPDLAALLRQPENTALQARINEDLRQTAYAIGASDVYLMDISGLTLAASSYRKTLSFVG 135

Query: 131 HNYGFRPYFIQTRTQGTGRFYAVGVTSGIPGYFLSSAVTGDNGEFLGAMVVKLEFPELER 190
            ++ +RPYF Q    G GR++A+G TSG  GYF ++ V  DN    G + VK      E 
Sbjct: 136 RSFSYRPYFTQALDGGLGRYFALGTTSGERGYFYAAPVE-DNARITGVVAVKFTVDGFEE 194

Query: 191 EWRQGSDTLLVSDARGIIFIANRPGWRYRHLQPLTDSDRAELKATRQYDKQPLQALAHEP 250
            WR G  T+LV D +G++F+++RP W +R L PLTD+ RA ++A RQY   PL  + H P
Sbjct: 195 TWRAGPATVLVRDLQGVVFMSSRPDWHFRALAPLTDAARARIEAARQY---PLSEVTHLP 251

Query: 251 --LRRFDDNSHLARVEAPDGSAD-YLWESLPLSAEGWTLHLLRRPQIAVEDLRNAGLAAA 307
             +    + + L  +  P G A+ Y+  +  +S  GW + +L     A +      + A 
Sbjct: 252 TEITPLSEGAELWSIATPRGEAESYVARTARISDAGWDVTILLPTAPARQQALQ--MMAI 309

Query: 308 GLWLALVFLLLFLNQRWRLAKLRQR------SREELERLVEERTRD-------------- 347
            + L L+ ++     + R A+L +R      ++ ELE  V +RT D              
Sbjct: 310 AMLLTLLLVMAAAIYQQRRARLLERMETQRAAQAELEARVTQRTADLNLANRQLQQEVVE 369

Query: 348 -------LRTAQDGLVQSAKLAALGQMSAALAHEINQPLTAQRMQLATLRLLLDHGRVDD 400
                  LR  Q  LVQ+ KLAALGQMSAAL+HE NQPL A +         LD  RV +
Sbjct: 370 RRQTEQRLRKTQAELVQAGKLAALGQMSAALSHEFNQPLAAVKSYAENAMTFLDRDRVPE 429

Query: 401 AYKALKPVDDMLTRMAALTGHLKTFARKSPSGLRERLDLAAVVDQALQLLDTRLRDEQVS 460
           A + +  +  M  RMA+++ HL+ FAR+ P      + L AV++ AL ++  RL+  Q  
Sbjct: 430 ARENVTRISAMTDRMASISKHLRNFARR-PQEEVGAVRLDAVIEDALSVMQVRLK--QTG 486

Query: 461 TVLHLT---RPAWVRGDAIRLEQVLINLLRNALDAMAGQPLKRLEVRLEADDQLWRLTVS 517
             +  T    P WVRG  +RL+QV++NLL NALDAM   P  R+ +R+ A D    L V 
Sbjct: 487 AAVDYTPPEGPVWVRGGHVRLQQVVVNLLSNALDAMTHTPAPRVTLRIIARDGAHMLEVR 546

Query: 518 DSGTGIAEEHLGQVFDPFFTTKPVGDGLGLGLAVSFAIIHESGGRLSADNHE-NGAVFCV 576
           D G GIA E    +FDPFFTTK  G GLGLGL++S+ I+ +  G L A+N    GAVF +
Sbjct: 547 DIGPGIAPEAAETMFDPFFTTKAPGGGLGLGLSISYNIVRDFDGTLEAENAPGGGAVFRL 606

Query: 577 TLP 579
            LP
Sbjct: 607 VLP 609