Pairwise Alignments

Query, 588 a.a., cytochrome C biogenesis protein CcmE from Pseudomonas fluorescens FW300-N2C3

Subject, 585 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  255 bits (652), Expect = 3e-72
 Identities = 193/561 (34%), Positives = 291/561 (51%), Gaps = 57/561 (10%)

Query: 42  SRASQQLALYANSLHTLIERYRALPAVLALDPELRSALKGPVSAAQQAALNRKLEQINGA 101
           +RA  +L+LY+N++ + ++R   +P +L+ DP + SAL      A    L    E+I  A
Sbjct: 51  NRAELRLSLYSNAIVSELQRNSVVPLLLSRDPVIISALSNDDHLATSQRLISLREEIGAA 110

Query: 102 AQSSTLELLDHSGLAVAASNWRLPSSYVGHNYGFRPYFIQTRTQGTGRFYAVGVTSGIPG 161
           +    ++LL+ SG  VAA++     + +G  +   PYF++        F      SG   
Sbjct: 111 S----MQLLNESGRTVAATD----RTKLGTQHRNAPYFVEALRANGTVFTITETESGRLD 162

Query: 162 YFLSSAVTGDNGEFLGAMVVKLEFPELEREWRQGSDTLLVSDARGIIFIANRPGWRYRHL 221
           +  S  +  D    LG MVV+++  +LE  W  GSD ++V+D+ G + +A  P WR R L
Sbjct: 163 FAFSRLIEFDQ-RVLGVMVVEVDLRKLETRWSGGSDAIMVTDSAGKVILATEPRWRSRTL 221

Query: 222 QPLTDSDRAELKATRQYDKQPLQALAHEPLRRFDDNSHLARVEAPDGSADYLWESLPLSA 281
               D+  A    +R      +QA      R            AP+    YL     L  
Sbjct: 222 TEALDAQSAPTAISRA-----IQATGEWTGR------------APE---TYLLGEAVLEL 261

Query: 282 E------GWTLHLLR---------RPQIAVEDLRNAGLAAAGLWL----ALVFLLLFLNQ 322
           E      GW L+               +A+E +  A L A G +L    A+    +F  +
Sbjct: 262 EMLVPFRGWRLYSFVTYSSVRERVNAVLALEIMTFAILIALGFYLLSRRAVSTSAIFQRE 321

Query: 323 RWRLAKLRQRSREEL-ERLVEERTRDLRTAQDGLVQSAKLAALGQMSAALAHEINQPLTA 381
              L  L +R ++E+ ER   E+T  L  A+  L QS KLAALG+MSAA++HE+NQPL A
Sbjct: 322 SAELRLLNERLQQEIAERERVEKT--LEQAEQTLAQSQKLAALGEMSAAVSHELNQPLAA 379

Query: 382 QRMQLATLRLLLDHGRVDDAYKALKPVDDMLTRMAALTGHLKTFARKSPSGLRERLDLAA 441
            +  LA  RLLL   R D++  +   +DD++ RM  +T  LK+FARK      + +DL  
Sbjct: 380 MKTYLAGARLLLQRKRPDESLSSFARIDDLIDRMGKITRQLKSFARKGEDAF-QIVDLRE 438

Query: 442 VVDQALQLLDTRLRDEQVSTVLHLTR-PAWVRGDAIRLEQVLINLLRNALDAMAGQPLKR 500
            +  AL +++ +++ E V    ++ + P  V GD IRLEQV++NLLRNA+DA AG P   
Sbjct: 439 ALSAALAIMEPQIKQEFVKIERNMPKQPVLVMGDRIRLEQVIVNLLRNAMDATAGTPNPV 498

Query: 501 LEVRLEADDQLWRLTVSDSGTGIAEEHLGQVFDPFFTTKPVGDGLGLGLAVSFAIIHESG 560
           +E+ L   +   RL+V D+G GI +    Q+F+PF+TTK  GDG+GLGLA+S  I+ + G
Sbjct: 499 VEIDLTTGETA-RLSVRDNGPGITD--FEQIFEPFYTTKRPGDGVGLGLAISSGIVSDHG 555

Query: 561 GRLSADNH-ENGAVFCVTLPI 580
           GRL A N    GAVF + LP+
Sbjct: 556 GRLMARNRTSRGAVFEMRLPL 576