Pairwise Alignments

Query, 441 a.a., C4-dicarboxylate ABC transporter from Pseudomonas fluorescens FW300-N2C3

Subject, 461 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  419 bits (1078), Expect = e-122
 Identities = 217/444 (48%), Positives = 302/444 (68%), Gaps = 7/444 (1%)

Query: 5   VMVVDDEGSIRSAVEQWLSLSGFQVQLFSRADECLARLPEHFPGVILSDVRMPGLSGLEL 64
           V++VDDE  I + + Q   L+G   +  +     ++ +   +PGV+++DV MPG+ G+ L
Sbjct: 11  VLIVDDEPHIGTVLMQLFELNGLNAEATTDPHLAISLIDRDWPGVVITDVNMPGMDGISL 70

Query: 65  LAEVRRRDPDLPVILLTGHGDVPMAVEAMRDGAYDFLEKPFSPEALLGSLRRALDKRTLV 124
           LA+  R D DLPV+LLTG GD+ MAV A++ GAYDFLEKPF+ E +L  ++RAL+KR+L 
Sbjct: 71  LAQCIRIDADLPVVLLTGFGDIAMAVSALKQGAYDFLEKPFNNEHMLDVVKRALEKRSLT 130

Query: 125 LENRRLHEQADARARLDGTLLGVSRALQNLRRQVLDLAALPVNVLIRGETGSGKELVARC 184
           LENR+L +Q ++ A     +LG S  +  LR  +  +   P +VLI GETG+GKELVARC
Sbjct: 131 LENRKLKKQLESHAIPGPRILGNSPGIVRLRNLIDMVVNTPADVLIEGETGTGKELVARC 190

Query: 185 LHDFGPRASKPFVALNCAAIPEALFEAELFGHESGAFTGAQGKRIGKLEYADGGTLFLDE 244
           LHD  PR    FVA+NC AIPE L E+ELFG E+GAFTG    R+GK E+A+GGTLFLDE
Sbjct: 191 LHDHSPRHQANFVAINCGAIPENLIESELFGAEAGAFTGIDKARVGKFEFANGGTLFLDE 250

Query: 245 IESMPLAQQVKLLRVLQEQKLERLGSNQSIAVDLRIIAATKPDLLDEARAGRFREDLAYR 304
           IES PL+ QVKLLRVL+++K+ERLGSN+SI +D+R++AATK DL      G FR+DL YR
Sbjct: 251 IESTPLSLQVKLLRVLEDRKVERLGSNKSIPLDIRVVAATKVDLKQLCDKGEFRQDLLYR 310

Query: 305 LNIAELRLPPLRERREDIPLLFEHFTHNAAERLGRPTVPLSGPQLSHLLSHDWPGNVREL 364
           LN+  + +PPL+ERREDIPLLF HF   A+ R  +  +  S    + + +HDWPGNVREL
Sbjct: 311 LNLVTIPIPPLKERREDIPLLFLHFARIASARYHKELIFPSAEHHARMTAHDWPGNVREL 370

Query: 365 ANVAERQV-LGLDQL------PTLETEPGQSLAAQQEAFEAQCLRAALARHKGDVKAVLE 417
            N+AER V LG +           + + G SL+ + E FE   +  AL+ ++G +K  +E
Sbjct: 371 RNLAERYVLLGAESAFAASLGGHAQLQSGMSLSQRVEFFERMLIEEALSHNRGSIKQTME 430

Query: 418 ELQLPRRTFNEKMQRHGLSREMFL 441
           +L+LPR+T  +KM+++ L R+ +L
Sbjct: 431 QLELPRKTLYDKMRKYDLDRKHYL 454