Pairwise Alignments

Query, 413 a.a., NAD(FAD)-utilizing dehydrogenase from Pseudomonas fluorescens FW300-N2C3

Subject, 396 a.a., conserved hypothetical protein TIGR00275 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 73.6 bits (179), Expect = 1e-17
 Identities = 102/403 (25%), Positives = 160/403 (39%), Gaps = 27/403 (6%)

Query: 11  DIAIIGGGPAGLMAAEVLSQAGLRVDLYDGMPSVGRKFLLAGVGGMNITHSEAFPAFLSR 70
           D+ IIG G AGLM A      G  V + D     GRK L++G G  N T+ +  PA  + 
Sbjct: 7   DVIIIGAGAAGLMCAATAGYRGRDVLVLDNAKQAGRKILISGGGRCNFTNLKVEPA--NF 64

Query: 71  YAERAPNLAPLLRAFGADELCTWIHGLGIDTFVGSSGRVFPTDMKAAPLLRAWLKRLRDA 130
                  +   L  + + +    +   GI+      G++F  D  A  ++   L     A
Sbjct: 65  ICGNPHFVKSALARYPSQQFIELVERHGIEYHERDHGQLFCND-SAKEIVTMLLTECEWA 123

Query: 131 GVVIHTRHRWL--GWNPDGSLRIASPEGDKTLHPKATLLALGGGSWSRLGSDGAWMLPLE 188
           GV I  R   L  G N  G   + +  G+  L   + ++A GG S  +LG+        E
Sbjct: 124 GVSIKLRTDILSVGKNEAGRFELNTSNGE--LSCDSLVIATGGLSMPKLGATPYGYQLAE 181

Query: 189 QRGVALAPLQPSNCGFEVAAWSDLMISKFAGAPLKNIAMGMN---DDVPRLGECVL-TAT 244
           Q G+ +    P++ G     W      K    PL  IA+       D     E +L T  
Sbjct: 182 QFGLKVL---PTHAGLVPFTWHS--EDKIRFEPLSGIAVPSRITAKDGTAFSEALLFTHR 236

Query: 245 GLEGSLVYALSAAIREAINQYGSATIHLDLLP----GRPVDKILQALNKPRGSRSMAKHL 300
           GL G  +  +S   +         TI ++LLP     + +++ L A  K     +++  L
Sbjct: 237 GLSGPAILQISNYWK------AGETIKINLLPNMDAAQAIEQQLAAHPKQSLRNTLSLWL 290

Query: 301 HSQLGIDGVKAALLRELTPAECFTDPARLAQAIKTLPVTLVKPRPLDEAISSAGGV-TFE 359
             +L        LL +        + A+L   +    V +        A  + GGV T E
Sbjct: 291 PKRLVEVLFDEVLLNKALNQLVHAERAKLVDDLHRWTVLMNGTEGYRTAEVTLGGVDTHE 350

Query: 360 ALDERLMLKQVPGVFCAGEMLDWEAPTGGYLLTACFASGRTAG 402
              + +   +VPG+F  GE++D     GG+     +ASG  AG
Sbjct: 351 LSSKTMEAIKVPGLFFIGEVMDVSGWLGGFNFQWAWASGVAAG 393