Pairwise Alignments

Query, 794 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2C3

Subject, 1236 a.a., sensory box histidine kinase/response regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  185 bits (469), Expect = 2e-50
 Identities = 131/386 (33%), Positives = 190/386 (49%), Gaps = 20/386 (5%)

Query: 397  LLDAGQKLEVLNQQLAHGNKLKDEFLATLTHELRTPMNGVIGSLELMETVEMDEELTQYQ 456
            LL+A Q  E+        N  K EFLA ++HE+RTPMN +IG L+L     + E+   Y 
Sbjct: 708  LLEAKQDAEL-------ANLYKSEFLANMSHEIRTPMNAIIGMLQLAGRTSLTEQQKDYL 760

Query: 457  QTAAGSARDMMRMVNGILTLTELQAGKLKAYPAPFSLRGVIDALQVQFGANAAAKGLDFK 516
              A+ SA+ ++R++N IL  ++++AGKL+     F L  V+D         A  KG++  
Sbjct: 761  DKASFSAQSLLRIINDILDFSKIEAGKLELEKVAFPLDKVLDHSLDLNALRAQEKGIELL 820

Query: 517  VDVSPGLADRLIGDSGKLAQCLECLLDNAIKFTRLGGLALRVSGRPTELDRLVLSFAVID 576
            +         L GD  +L Q L  LL NA+KFT+ G + L          R+ L F V D
Sbjct: 821  LYAPVSAGIMLKGDPLRLGQVLINLLSNAVKFTQNGEIELGCEDVGERDHRITLKFWVRD 880

Query: 577  TGIGFTDLGEATLYQRFFQLDGSMTREYGGLGVGLAICRQLVELLGGRLTHTSEPGRGSR 636
            TGIG +   +  L+  F Q DGS TR+YGG G+GL+I + LV ++GG +   SEPG GS 
Sbjct: 881  TGIGISREQQDKLFDAFAQADGSTTRKYGGTGLGLSISKHLVSMMGGTMQVESEPGVGST 940

Query: 637  FQLDVEFDVALPAAVPTPFSFGGRQGSRQPQDCTVLLADDNNIDQLVMRGMLLKLGYRVR 696
            F   V F++A  A V  P     R  S +      L+ DDN     +   ++    + V 
Sbjct: 941  FSFTVSFEIAEEAKV-VPMVVPERLASLR-----TLVVDDNPTALQIYSSVMRDFHFEVE 994

Query: 697  TADSGRAALDLLHGERFDAVLLDCQSPPLDGVSVCCQIRALSGCEEL---PVLVVSPNLG 753
            TA +G  AL  L  ++ D VLLD   P +DG+ V   I  +    +L   PV+++     
Sbjct: 995  TASTGAEALYKLCKQQVDLVLLDWMMPEMDGIQVIDAIDEMVAEGKLAARPVIIIMTAYA 1054

Query: 754  QE----RCPSGALIDYLSKPVKFEAL 775
             E       S  +   L KP K  +L
Sbjct: 1055 AEPLKVDLDSDRVFAMLQKPFKASSL 1080



 Score = 67.8 bits (164), Expect = 4e-15
 Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 12/137 (8%)

Query: 648  PAAVPTP--FSFGGRQGSRQPQDCTVLLADDNNIDQLVMRGMLLKLGYRVRTADSGRAAL 705
            P A+P P     G  QG        VLL +DN I+Q V   +L   GY V  AD+G+ +L
Sbjct: 1093 PKALPAPPVEDEGEHQG-------VVLLVEDNFINQQVATELLKSAGYEVDVADNGQISL 1145

Query: 706  DLLHGERFDAVLLDCQSPPLDGVSVCCQIRALSGCEELPVLVVSPNL---GQERCPSGAL 762
            +++    +DA+L+D Q P +DG++   ++R     +ELP++ ++ +     +E+  +  +
Sbjct: 1146 EMVGKRSYDAILMDIQMPVMDGLTAATELRKRYSFDELPIIAMTAHAMSGDREKSLAAGM 1205

Query: 763  IDYLSKPVKFEALQATL 779
              +++KP+    L  TL
Sbjct: 1206 NAHITKPIVLNELFETL 1222