Pairwise Alignments

Query, 794 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2C3

Subject, 1763 a.a., sensory box histidine kinase/response regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  207 bits (528), Expect = 3e-57
 Identities = 125/364 (34%), Positives = 199/364 (54%), Gaps = 14/364 (3%)

Query: 415  NKLKDEFLATLTHELRTPMNGVIGSLELMETVEMDEELTQYQQTAAGSARDMMRMVNGIL 474
            N+ K +FLA ++HE+RTPMN +IG  +L    E+D +   Y +    +++ ++ ++N IL
Sbjct: 1034 NQAKSDFLANMSHEIRTPMNAIIGMSQLCLQTELDRKQRNYVEKIERASKSLLGIINDIL 1093

Query: 475  TLTELQAGKLKAYPAPFSLRGVIDALQVQFGANAAAKGLDFKVDVSPGLADRLIGDSGKL 534
              ++++AGKL     PF L  +++ L   F   AA K L+    V+PG+   L GD  +L
Sbjct: 1094 DFSKIEAGKLDIEVVPFQLDTILEDLGDMFSVKAADKQLELLFSVAPGVPTHLEGDPLRL 1153

Query: 535  AQCLECLLDNAIKFTRLGGLALRVSGRPTELDRLVLSFAVIDTGIGFTDLGEATLYQRFF 594
            +Q L  L++NAIKFT  G + L +S    + D++ L FAV D+GIG T   +A L++ F 
Sbjct: 1154 SQVLINLMNNAIKFTERGEVMLSISELARDEDQVQLKFAVRDSGIGLTAEQQAKLFKSFS 1213

Query: 595  QLDGSMTREYGGLGVGLAICRQLVELLGGRLTHTSEPGRGSRFQLDVEFDVALPAAVPTP 654
            Q D S TR+YGG G+GLAIC+QLVEL+GG +   S+ G GS F   V   VA  A +   
Sbjct: 1214 QADTSTTRKYGGTGLGLAICKQLVELMGGEIGVDSQFGNGSTFYFTVSVKVAQNAQLNV- 1272

Query: 655  FSFGGRQGSRQPQDCTVLLADDNNIDQLVMRGMLLKLGYRVRTADSGRAALDLLHGERFD 714
                     ++ +   VL+ DDN+  + ++R  L  +G+ V +A SG  AL+      + 
Sbjct: 1273 --------EQELEGMAVLVVDDNSTARDILRTTLQSMGFSVDSARSGMEALEKCAERDYR 1324

Query: 715  AVLLDCQSPPLDGVSVCCQIRALSGCEELPVLVVSPNLGQE---RCPSGALIDYLSKPVK 771
              L+D + P +DG     ++R L   +   +L+VS +   E   +     +  Y++KP+ 
Sbjct: 1325 IALIDWKMPEMDGTETAARMRELK--QPPLILMVSAHANSEFIDKVEEMGINGYITKPIS 1382

Query: 772  FEAL 775
               L
Sbjct: 1383 ASRL 1386



 Score = 79.3 bits (194), Expect = 2e-18
 Identities = 54/155 (34%), Positives = 81/155 (52%), Gaps = 21/155 (13%)

Query: 659  GRQGSR------QPQDCT---------VLLADDNNIDQLVMRGMLLKLGYRVRTADSGRA 703
            GRQG +      QP D           +LL +DN ++Q V    L ++G  +  AD+G+ 
Sbjct: 1395 GRQGHKPVRRKAQPMDAQKLSGLKGKRILLVEDNEMNQEVASEFLEQVGVVLSIADNGQI 1454

Query: 704  ALDLLHGERFDAVLLDCQSPPLDGVSVCCQIRALSGCEELPVLVVSPNL---GQERCPSG 760
            AL+ L  + FD VL+DCQ P +DG     ++R L G  ELPV+ ++ N     +E C   
Sbjct: 1455 ALEKLGQQSFDLVLMDCQMPVMDGYQATRELRKLPGLAELPVVAMTANAMAGDKEMCLLA 1514

Query: 761  ALIDYLSKPVKFEALQATLQRRVLCPRQG--ESAD 793
             + D+++KP++   L  TL  + LCP     ESAD
Sbjct: 1515 GMNDHIAKPIEVGILYQTL-LQYLCPEAKGLESAD 1548