Pairwise Alignments

Query, 794 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2C3

Subject, 564 a.a., response regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  218 bits (556), Expect = 6e-61
 Identities = 133/390 (34%), Positives = 209/390 (53%), Gaps = 10/390 (2%)

Query: 24  TQSLPLGHALQVFEDAGGTATLDEVLAQSAAGAFKPHDKATLNAGYSRSAFWLKIDLHYR 83
           T  LPL   L + ED+GG  + D+V  Q+    F P  K + N G+S S +W+++ +H  
Sbjct: 43  TALLPLTPYLSLLEDSGGQLSFDDVRQQAEQNKFIPL-KGSANFGFSPSTWWVRVSVH-- 99

Query: 84  PDNP-DAQRTWLLELAYPPLDHLDLYLPDAAGAYRLVRQTGDALPFASREIRQNNYLFSL 142
             NP D  R + L   YP +D LDL+ P A G   L   TGD   F SR +    ++F L
Sbjct: 100 --NPADEARQFYLRQDYPLIDFLDLWQPSADGW--LHTATGDRRAFHSRLLDLRTFVFPL 155

Query: 143 AFKPEQQQTVYLRLQSQGSIQAPLTLWSSTAYLEQQPVRLYVLGIIYGVLLGMLVYNLFI 202
              P + QT+YLR ++QGS+   L L++ +  + Q       LGI YG  + +LVYNL I
Sbjct: 156 TLAPGETQTLYLRFETQGSLNIGLALYAPSELISQVTWEYLSLGIYYGGFIVLLVYNLII 215

Query: 203 YLSVRDTSYLYYIFYIASFGLYQLSVNGAAVEYFWPDNPWWANAATPFFIGCAGLFGS-Q 261
           +L+VR+ ++++Y+ Y+ S+GLY    NG + +Y WP+N W AN +    +  + LFG+ +
Sbjct: 216 FLTVRERAFIFYVLYVLSYGLYMSVHNGLSFQYLWPENSWMANKSLLLLLALS-LFGALR 274

Query: 262 FARSFLQTAQHGRWMDRMLLALIGYSAVVISLSLMTSYALALRLATALALVFTVAIFAAG 321
           F R  L  AQ     DR+   +     + + L+ + SY L + L + L     + +   G
Sbjct: 275 FTREILGLAQILPGADRLAARVEWGCVLGLILAPILSYHLVVLLLSVLTTFICIQLLVVG 334

Query: 322 LFAWWRGLRVARYFIIAWSAFLLGGIINTLMVLGYLPNVFLTMYASQIGSAIEVALLSLA 381
           + A  +G R AR++++A+SA LLG  +  L   G LP+   T  A Q+GS +E+ LLSLA
Sbjct: 335 VMALMKGSRPARFYLVAFSALLLGAFVYMLKSFGVLPHNAFTQNAFQLGSLVEMVLLSLA 394

Query: 382 LADRINAMREQQAQTLLDAGQKLEVLNQQL 411
           L  R+  ++ +    +L         ++QL
Sbjct: 395 LGSRMQDIKRRNHIDVLTGLYNRRFFDEQL 424