Pairwise Alignments

Query, 794 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2C3

Subject, 1768 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  203 bits (517), Expect = 6e-56
 Identities = 132/406 (32%), Positives = 211/406 (51%), Gaps = 30/406 (7%)

Query: 376  ALLSLALADRINAMREQ--QAQTLLDAGQKLEVLNQQLAHGNKLKDEFLATLTHELRTPM 433
            A+LS+A    +  + E+  QA+ + DA              +K K +FLA ++HE+RTPM
Sbjct: 1009 AVLSMADISSLKLLSEELTQAKDVADAA-------------SKAKSDFLANMSHEIRTPM 1055

Query: 434  NGVIGSLELMETVEMDEELTQYQQTAAGSARDMMRMVNGILTLTELQAGKLKAYPAPFSL 493
            N +IG  +L     +D++   Y +    +++ ++ ++N IL  ++++AGKL     PF L
Sbjct: 1056 NAIIGMSQLCLQTSLDKKQQNYVEKIDRASKSLLGIINDILDFSKIEAGKLDIEAVPFQL 1115

Query: 494  RGVIDALQVQFGANAAAKGLDFKVDVSPGLADRLIGDSGKLAQCLECLLDNAIKFTRLGG 553
              +++ L   F   AA K L+    V+P +   L+GD  +L+Q L  L++NAIKFT  G 
Sbjct: 1116 DTMLEDLSDMFSVKAADKQLELLFAVAPNIPRHLVGDPLRLSQVLINLMNNAIKFTEQGE 1175

Query: 554  LALRVSGRPTELDRLVLSFAVIDTGIGFTDLGEATLYQRFFQLDGSMTREYGGLGVGLAI 613
            + L +S    E + ++L F+V D GIG T+     L+Q F Q D S TR+YGG G+GLAI
Sbjct: 1176 VMLSISQLVREDEEILLKFSVRDNGIGLTEEQRGKLFQSFSQADSSTTRKYGGTGLGLAI 1235

Query: 614  CRQLVELLGGRLTHTSEPGRGSRFQLDVEFDVALPAAVPTPFSFGGRQGSRQPQDCTVLL 673
            C+QLVEL+GG +   S+ G GS F   V F VA    +           +++ +   +L+
Sbjct: 1236 CKQLVELMGGEIGVESQFGNGSTFFFSVRFKVADNQLIKV---------AQELEGMRILV 1286

Query: 674  ADDNNIDQLVMRGMLLKLGYRVRTADSGRAALDLLHGERFDAVLLDCQSPPLDGVSVCCQ 733
            ADDN   + ++R  L  +G+ V T  SG  AL       +   L+D + P +DG+     
Sbjct: 1287 ADDNATARDILRSTLESMGFTVDTVRSGAEALSRCQETDYGVALIDWRMPEMDGLETA-- 1344

Query: 734  IRALSGCEELP-VLVVSPNLGQ---ERCPSGALIDYLSKPVKFEAL 775
             R LS     P  L+VS +      ++     +  Y++KP+    L
Sbjct: 1345 RRLLSERTNPPKTLIVSAHADGDFIDKAEQAEISGYITKPISASRL 1390



 Score = 69.3 bits (168), Expect = 2e-15
 Identities = 36/112 (32%), Positives = 63/112 (56%), Gaps = 3/112 (2%)

Query: 671  VLLADDNNIDQLVMRGMLLKLGYRVRTADSGRAALDLLHGERFDAVLLDCQSPPLDGVSV 730
            +LL +DN ++Q V    L ++G  +  A++G+ AL+ L  + FD VL+DCQ P +DG   
Sbjct: 1426 ILLVEDNEMNQEVASEFLEQVGVILSIAENGQVALEKLAMQSFDLVLMDCQMPVMDGYQA 1485

Query: 731  CCQIRALSGCEELPVLVVSPNL---GQERCPSGALIDYLSKPVKFEALQATL 779
              ++R      +LPV+ ++ N     +E C    + D+++KP++   L  TL
Sbjct: 1486 TAELRKRPELADLPVIAMTANAMAGDKEMCLRAGMNDHIAKPIEVSLLYKTL 1537