Pairwise Alignments

Query, 794 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2C3

Subject, 858 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  214 bits (544), Expect = 2e-59
 Identities = 136/414 (32%), Positives = 218/414 (52%), Gaps = 9/414 (2%)

Query: 370 GSAIEVALLSLALADRINAMREQQAQTLLDAGQKLEVLNQQLAHGNKLKDEFLATLTHEL 429
           G AI    LS  +      + E++A     A  +L    ++    N+ K EFLA ++HE+
Sbjct: 311 GKAINPDDLSRGVVWTFEDVTERKA-----AESELRHAREKAEAANRAKSEFLANMSHEI 365

Query: 430 RTPMNGVIGSLELMETVEMDEELTQYQQTAAGSARDMMRMVNGILTLTELQAGKLKAYPA 489
           RTP  G++G L+L+    ++E+  +Y + A GS + ++ ++N IL +++++AGKL  +P 
Sbjct: 366 RTPFTGILGVLDLLLHTPLNEKQERYIRLAYGSTKQLLAILNDILDISKIEAGKLVIHPE 425

Query: 490 PFSLRGVIDALQVQFGANAAAKGLDFKVDVSPGLADRLIGDSGKLAQCLECLLDNAIKFT 549
              L  ++  L     A AA KGL+F+  +   +  ++ GD  +L Q +  LL+NAIKFT
Sbjct: 426 EVDLVLLLGELTEVQAAAAAQKGLEFRYHIKGIIPPKIHGDPVRLRQIMANLLNNAIKFT 485

Query: 550 RLGGLALRVSGRPTELDRLVLSFAVIDTGIGFTDLGEATLYQRFFQLDGSMTREYGGLGV 609
             G + L +        R  L   V D+GIG     + T++ +F Q D S TR +GG G+
Sbjct: 486 NSGWVELDIECTRIAPGRQHLRVEVRDSGIGVPPELQETIFDKFTQADSSTTRLFGGTGL 545

Query: 610 GLAICRQLVELLGGRLTHTSEPGRGSRFQLDVEFDVALPAAVPTPFSFGGRQGSRQPQDC 669
           GL IC+QLVEL+ G +  +S  G GS F  D+E   + P   P P    G   +  P+D 
Sbjct: 546 GLTICKQLVELMHGSIGVSSNSGEGSCFWFDIELPESDPTVSPVPVLPAGSPITALPRDT 605

Query: 670 TVLLADDNNIDQLVMRGMLLKLGYRVRTADSGRAALDLLHGERFDAVLLDCQSPPLDGVS 729
            +LL DD   ++ V+   L +   +VR A +G  A+ L    + DA+L+DCQ   +DG  
Sbjct: 606 RILLVDDTEANREVLAEYLAQAHCQVRQAANGLEAVTLAESWQPDAILMDCQMAGMDGYE 665

Query: 730 VCCQIRALSG-CEELPVLVVSPNL---GQERCPSGALIDYLSKPVKFEALQATL 779
              QIR   G     P++ ++  +    +E+C +  + DYL KPV  + L AT+
Sbjct: 666 ATRQIRIQEGQRRRTPIIALTAFVMRGDREKCLAAGMDDYLPKPVDAQTLIATI 719



 Score = 58.5 bits (140), Expect = 1e-12
 Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 10/123 (8%)

Query: 671 VLLADDNNIDQLVMRGMLLKLGYRVRTADSGRAALDLLHGERFDAVLLDCQSPPLDGVSV 730
           +LL DDN   +     +L  LG +V++A SG  AL L     FD VL+DC+ P LDG   
Sbjct: 740 ILLVDDNPEIREASTCLLEALGCQVQSASSGEEALQLGPEADFDLVLMDCRMPGLDG--- 796

Query: 731 CCQIRALSGCEE-LPVLVVS-----PNLGQERCPSGALIDYLSKPVKFEALQATLQRRVL 784
           C   RA    E   P  +++     P+  + +C    + D+L+KP   + L  TL RR L
Sbjct: 797 CATTRAWRARERGTPTAIIALTAGDPDESRAQCREAGMNDFLAKPFSEQEL-VTLLRRWL 855

Query: 785 CPR 787
            P+
Sbjct: 856 APQ 858