Pairwise Alignments

Query, 794 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2C3

Subject, 940 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  202 bits (514), Expect = 7e-56
 Identities = 130/404 (32%), Positives = 200/404 (49%), Gaps = 7/404 (1%)

Query: 390 REQQAQTLLDAGQKLEVLNQQLAHGNKLKDEFLATLTHELRTPMNGVIGSLELMETVEMD 449
           R++  + + +  ++LE L       N  K  FLA ++HE+RTP+N + G   L+    + 
Sbjct: 538 RQRLEELVQERTRQLEELKDAAESANVAKSAFLANMSHEIRTPLNAMTGLTHLIRRAGLK 597

Query: 450 EELTQYQQTAAGSARDMMRMVNGILTLTELQAGKLKAYPAPFSLRGVIDALQVQFGANAA 509
            +  ++      +A+ ++ ++N IL L++++AGK     AP  +  ++  +         
Sbjct: 598 PQQAEHMDKLEAAAQHLLGVINAILDLSKIEAGKFALEEAPVRVESLLGNVASFLQERVQ 657

Query: 510 AKGLDFKVDVSPGLADRLIGDSGKLAQCLECLLDNAIKFTRLGGLALRVSGRPTELDRLV 569
           AKGL  + +  P L   L+GD  +L Q L     NA+KFT  G + LRV          +
Sbjct: 658 AKGLVLRTEAQP-LPPHLLGDPTRLQQALLNYAGNALKFTEQGSITLRVHTLEEGEADAL 716

Query: 570 LSFAVIDTGIGFTDLGEATLYQRFFQLDGSMTREYGGLGVGLAICRQLVELLGGRLTHTS 629
           L F V DTGIG        L+  F Q D S TR YGG G+GLAI R+L +L+GG    +S
Sbjct: 717 LRFEVQDTGIGIPPEAMHKLFSAFEQADNSTTRRYGGTGLGLAITRKLAQLMGGEAGASS 776

Query: 630 EPGRGSRFQLDVEFDVALPAAVPTPFSFGGRQGSRQPQDC---TVLLADDNNIDQLVMRG 686
           EPGRGS F                    GG    R  Q+    TVLLA+D  I+Q + + 
Sbjct: 777 EPGRGSTFWFTARLKKGKERYGNGAPLAGGNAEQRLRQEFAGRTVLLAEDEPINQEITKF 836

Query: 687 MLLKLGYRVRTADSGRAALDLLHGERFDAVLLDCQSPPLDGVSVCCQIRALSGCEELPVL 746
           ML  +G RV  A  G+ A++   G  +  +L+D Q P +DG+    +IR L    + P+L
Sbjct: 837 MLEDVGLRVELAPDGKVAVERARGNDYALILMDMQMPLMDGLDATREIRQLQRHRQTPIL 896

Query: 747 VVSPNLGQE---RCPSGALIDYLSKPVKFEALQATLQRRVLCPR 787
            ++ N   E   RC    + D+++KPV  + L ATL + +L  R
Sbjct: 897 AMTANAFAEDKARCLGAGMNDFIAKPVNPDVLYATLLQWLLQDR 940



 Score = 26.9 bits (58), Expect = 0.005
 Identities = 13/51 (25%), Positives = 25/51 (49%)

Query: 256 GLFGSQFARSFLQTAQHGRWMDRMLLALIGYSAVVISLSLMTSYALALRLA 306
           G+   +     L+  ++G W+   L+ L GY  ++++L    + A   RLA
Sbjct: 187 GVMSIKLPTEQLRQREYGAWLHNFLIRLGGYLVLLLTLGSYLNRAFVGRLA 237