Pairwise Alignments

Query, 794 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2C3

Subject, 1281 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  199 bits (506), Expect = 8e-55
 Identities = 133/413 (32%), Positives = 198/413 (47%), Gaps = 16/413 (3%)

Query: 380  LALADRINAMREQQAQTLLDAGQKLEVLNQQLAHGNKLKDEFLATLTHELRTPMNGVIGS 439
            L L   +   R    + +     +L     +    ++ K  FLA ++HE+RTPMN ++G 
Sbjct: 783  LRLEQELEQHRHHLEELVHARTMELAEARDEAESASRAKSAFLANMSHEIRTPMNAILGL 842

Query: 440  LELMETVEMDEELTQYQQTAAGSARDMMRMVNGILTLTELQAGKLKAYPAPFSLRGVIDA 499
              L+     D    +      G+A  ++ ++N IL L++++A KL      F L  + D 
Sbjct: 843  SHLLGREVGDARARERVDKIHGAATHLLNIINDILDLSKIEAEKLHLDMQDFLLARLFDN 902

Query: 500  LQVQFGANAAAKGLDFKVDVSPGLADRLIGDSGKLAQCLECLLDNAIKFTRLGGLALRVS 559
             +        AKGL  +  + P L   L GD+  L Q L   L NA+KF+  G + L   
Sbjct: 903  AENLLRPQLEAKGLRLERHLDPALPPVLRGDAMHLQQILVNFLSNAVKFSDQGHITLGAR 962

Query: 560  GRPTELDRLVLSFAVIDTGIGFTDLGEATLYQRFFQLDGSMTREYGGLGVGLAICRQLVE 619
                   ++ L   V D GIG     +A L+Q F Q D S TR+YGG G+GLAI ++L+ 
Sbjct: 963  LLSRSQSQVELRLEVADQGIGIAPEQQAALFQAFEQADNSTTRKYGGTGLGLAISKRLIR 1022

Query: 620  LLGGRLTHTSEPGRGSRFQLDVEFDVALPAAVPT--------PFSFGGRQGSRQPQDCTV 671
            L+GG +   S+PG+GS F + +  +VA  AA  T        P     R G      C +
Sbjct: 1023 LMGGDIGVDSKPGQGSVFWISLRLEVADTAAGTTAATAEQELPARLRARHGG-----CRI 1077

Query: 672  LLADDNNIDQLVMRGMLLKLGYRVRTADSGRAALDLLHGERFDAVLLDCQSPPLDGVSVC 731
            LLA+DN ++Q V + +L   G  V  A+ G  A+ L     FD VL+D   P LDG+   
Sbjct: 1078 LLAEDNALNQEVAQDLLHDAGLAVSVAEDGHQAVSLAQSGGFDLVLMDVNMPHLDGLQAT 1137

Query: 732  CQIRALSGCEELPVLVVSPNLGQE---RCPSGALIDYLSKPVKFEALQATLQR 781
              IR L GC +LP+L ++     E   RC    + D+++KPV  E L   L R
Sbjct: 1138 RAIRELPGCADLPILAMTAGAFAEDRARCLEAGMNDFVAKPVVPEVLYQALLR 1190