Pairwise Alignments

Query, 944 a.a., ABC-ATPase UvrA from Pseudomonas fluorescens FW300-N2C3

Subject, 953 a.a., excinuclease ABC, A subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 1174 bits (3038), Expect = 0.0
 Identities = 594/945 (62%), Positives = 738/945 (78%), Gaps = 10/945 (1%)

Query: 1   LDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           L KI +RGAR HNLK+ID+ +PRD+L+VITGLSGSGKSSLAFDT+YAEGQRRYVESLSAY
Sbjct: 4   LKKIEVRGAREHNLKSIDVDIPRDRLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAY 63

Query: 61  ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGIPRC 120
           ARQFL MM+KPDVD I GLSPAISIEQK+TS NPRSTVGT+TEIYDY+RLL+ARVG P  
Sbjct: 64  ARQFLDMMQKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLFARVGTPYS 123

Query: 121 PDHDIPLEAQTVSQMVDLVLAQPEGSKLMLLAPVVRERKGEHLMVFEELRAQGFVRARVN 180
           P   +P+EAQ V  MVD V+A  EG++  LLAP++R+RKGE+   F ELR QGF R +V+
Sbjct: 124 PATGLPIEAQQVQDMVDRVMAMEEGTRAYLLAPIIRDRKGEYRKEFLELRKQGFQRVKVD 183

Query: 181 GKLCELDELPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALV--APMD 238
           G   +LD  P LDK+ +H IDVVVDR  V+  ++ RLA+SF TAL LADGIA++  AP +
Sbjct: 184 GAFHDLDSPPTLDKKFRHDIDVVVDRIVVKEGIETRLADSFRTALDLADGIAILETAPTE 243

Query: 239 DEPGEEIIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDTKRLV-NG 297
            EP E   FS +FACP+ G  I E+EP+LFSFN P GACP CDGLGV+ FFD + +V + 
Sbjct: 244 GEP-ERHTFSEKFACPVSGFTIPEIEPRLFSFNAPFGACPACDGLGVELFFDERLVVPDA 302

Query: 298 ELTLAEGAIRGWDR-RNVYYFQMLGSLAAHYKFSLDKPFNELPADQQKSILHGSGSQNVD 356
            LTLA GA+  W + ++ Y+ Q + ++A HY+F    P+  LP   Q+  L GSG + + 
Sbjct: 303 TLTLANGALAPWRKGKSPYFLQTINAIAKHYEFDPKTPWKALPEKVQEVFLRGSGEEEIT 362

Query: 357 FKYLNDRGDIVKRSHPFEGIVPNLERRYRETESASVREELAKFLSTQPCPDCRGTRLRRE 416
           F+Y ++ G + + S  FEG++PN+ERRYRET+S+ +REE  ++ + + C  C G RLR E
Sbjct: 363 FRY-DEGGRVYQVSRAFEGVIPNMERRYRETDSSWIREEFERYQNNRSCGTCGGYRLRPE 421

Query: 417 ARHVWVGEKTLPAVTNLPIGDATDYFGGLK--LTGRRGEIADKILKEIRERLQFLVNVGL 474
           A  V +    +  V  + I +A D+   +   L+ ++ EIA  ILKEIRERL FL NVGL
Sbjct: 422 ALAVKIAGLHVGEVVQMSIREAHDWCRTVPEHLSVQKNEIARAILKEIRERLGFLNNVGL 481

Query: 475 DYLTLDRSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLGTLKHLR 534
           +YLTL R+A TLSGGE+QRIRLASQIG+GL GV+Y+LDEPSIGLHQRDNDRLL TLK+LR
Sbjct: 482 EYLTLSRNAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLTTLKNLR 541

Query: 535 DIGNTVIVVEHDEDAIRLADYVVDIGPGAGVHGGHIVAQGTAAEVMAHPDSLTGKYLSGR 594
           D GNTVIVVEHDE+A+R ADYV DIGPGAGVHGG +VA GT A++MA+P S+TG YL+GR
Sbjct: 542 DQGNTVIVVEHDEEAVREADYVFDIGPGAGVHGGQVVAHGTPAQIMANPASITGDYLAGR 601

Query: 595 VKIKVPAKRTPRNKKLSLTLKGARGNNLRNVDLEIPIGLLTCVTGVSGSGKSTLINNTLF 654
            +I VPA R   NKK  +T++ A GNNL+++ ++ P+G   CVTGVSG GKSTL   TLF
Sbjct: 602 REIPVPATRRKGNKK-KVTVRKATGNNLQDLTVDFPLGKFVCVTGVSGGGKSTLTIETLF 660

Query: 655 PLSATALNGATTLEAAAHDSIKGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELF 714
             ++  LNGA    A   ++IKGLEHLDKV+DIDQ PIGRTPRSNPATYTG FTPIR+ F
Sbjct: 661 KTASMRLNGARQTPAPC-ETIKGLEHLDKVIDIDQRPIGRTPRSNPATYTGAFTPIRDWF 719

Query: 715 AGVPESRSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRET 774
           AG+PE+R+RGY PGRFSFNVKGGRCEACQGDG+IK+EMHFLPD+YV C+ CK KRYNRET
Sbjct: 720 AGLPEARTRGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVECETCKGKRYNRET 779

Query: 775 LEIKYKGKNIHETLEMTIEEARVFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEA 834
           LE+ +KGK+I + L+MT+E+A+ FF AVP++  K+  LM VGL YIK+GQ ATTLSGGEA
Sbjct: 780 LEVTFKGKSIADVLDMTVEDAQEFFKAVPSIREKMDALMRVGLGYIKVGQQATTLSGGEA 839

Query: 835 QRVKLSRELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVI 894
           QRVKLS+EL+KR TG+TLYILDEPTTGLHF D+++LL+VLH L + GNTVVVIEHNLDVI
Sbjct: 840 QRVKLSKELAKRSTGRTLYILDEPTTGLHFEDVRKLLEVLHELVEQGNTVVVIEHNLDVI 899

Query: 895 KTADWLVDLGPEGGSKGGQIIAVGTPEQVAEMKQSYTGYYLKPLL 939
           KTADWL+D+GPEGG  GG ++A GTPEQVAE+ +S+TG YLKP+L
Sbjct: 900 KTADWLIDIGPEGGDGGGTLVATGTPEQVAEVAESHTGRYLKPML 944