Pairwise Alignments

Query, 810 a.a., pyrroloquinoline quinone biosynthesis protein PqqF from Pseudomonas fluorescens FW300-N2C3

Subject, 426 a.a., processing peptidase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 74.3 bits (181), Expect = 1e-17
 Identities = 71/238 (29%), Positives = 98/238 (41%), Gaps = 28/238 (11%)

Query: 4   PDSLRPHTETLANGLRVTLRHVPGLKRSAAVLRVAAGSHDAPLAWPGMAHLLEHLFFLGT 63
           PDS    TE LANG R+   H+PGLK +A  + V AG     L   G+AH LEH+ F GT
Sbjct: 5   PDSQTQLTE-LANGFRIVTEHMPGLKSAAVGIWVLAGGRHERLEQNGIAHFLEHMAFKGT 63

Query: 64  ERFPAGEHLMAYVQRHGGQVNARTSERTTDFFFELPPATFADGLERLWDMLAQPRLDEAE 123
           E+  +   +   ++  GG +NA TS   T ++  +  A     ++ L D+L  P     E
Sbjct: 64  EK-RSTLGIAEAIEDVGGYINAYTSREVTAYYARVLEADVGLAVDVLADILRNPVFAPEE 122

Query: 124 QLREREVLHAEF-----------IAWSQDAAAQRQLALYDGVSASHPLRGFHAGNRDSLA 172
              ER V+  E              W Q+ A   Q      +  +  +RGF   +     
Sbjct: 123 IEVERGVILQEIGQALDTPDDVVFDWLQERAFADQPMGRTILGPAERVRGFARNDFFDFV 182

Query: 173 VEHAEFQSALHNFYRRFYQSGQMTLSLVGPQSIDALKALAQR-FGSHVSAGEAVAGSS 229
            EH              Y    M LS  G    DAL ALA++ FG       A A  +
Sbjct: 183 GEH--------------YTPETMILSAAGAVDHDALVALAEKLFGDMARRDRADAAQA 226