Pairwise Alignments

Query, 478 a.a., nitrogen regulation protein NR(I) from Pseudomonas fluorescens FW300-N2C3

Subject, 469 a.a., nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) from Shewanella loihica PV-4

 Score =  641 bits (1654), Expect = 0.0
 Identities = 320/467 (68%), Positives = 381/467 (81%), Gaps = 5/467 (1%)

Query: 4   SETVWIVDDDRSIRWVLEKALQQEGMTTQSFDSADGVMSRLARQQPDVIISDIRMPGASG 63
           +E VW++DDD SIRWV+E+AL+   ++  SF +A+ +   L + QP VIISDIRMPG  G
Sbjct: 2   TEKVWVLDDDSSIRWVVERALKGAKISCASFAAAESLWQALEQTQPQVIISDIRMPGTDG 61

Query: 64  LDLLARIREQHPRLPVIIMTAHSDLDSAVASYQGGAFEYLPKPFDVDEAVSLVKRANQHA 123
           L LL R++  +P +PVIIMTAHSDLDSAV++YQ GAFEYLPKPFD+DEA+ LV+RA  HA
Sbjct: 62  LTLLDRLQLHYPHIPVIIMTAHSDLDSAVSAYQAGAFEYLPKPFDIDEAIGLVERALSHA 121

Query: 124 QEQQGMEEVPALARTPEIIGEAPAMQEVFRAIGRLSHSNITVLINGESGTGKELVAHALH 183
           +EQ          + PEIIGEAPAMQEVFRAIGRLS S+I+VLING+SGTGKELVA ALH
Sbjct: 122 KEQSPKVISQPEVKAPEIIGEAPAMQEVFRAIGRLSRSSISVLINGQSGTGKELVAGALH 181

Query: 184 RHSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAANLRRGRFEQADGGTLFLDEIG 243
           +HSPR   PFIALNMAAIPK+L+ESELFGHEKGAFTGAAN+R+GRFEQADGGTLFLDEIG
Sbjct: 182 KHSPRKDKPFIALNMAAIPKELIESELFGHEKGAFTGAANVRQGRFEQADGGTLFLDEIG 241

Query: 244 DMPADTQTRLLRVLADGEFYRVGGHTPVKVDVRIIAATHQNLETLVHAGKFREDLFHRLN 303
           DMP D QTRLLRVLADG+FYR+GGH+PV+VDVRIIAATHQNLE+LV  G FREDLFHRLN
Sbjct: 242 DMPLDVQTRLLRVLADGQFYRIGGHSPVQVDVRIIAATHQNLESLVAKGDFREDLFHRLN 301

Query: 304 VIRIHIPRLADRREDIPTLARHFLSRAAQELAVEPKLLKSETEEYLKNLPWPGNVRQLEN 363
           VIR+H+P L+ RREDIP LARHFL+ AA+E++VEPK+L   T + L +LPWPGNVRQLEN
Sbjct: 302 VIRVHLPPLSQRREDIPQLARHFLATAAKEISVEPKILTKATADTLASLPWPGNVRQLEN 361

Query: 364 TCRWITVMASGREVHISDLPPELL--SLPQDSAPVT---NWEQALRQWADQALARGQSSL 418
           TCRW+ VMASG+E+   DLPPELL  S   DS+P      W++AL QW DQ L+ G+S L
Sbjct: 362 TCRWLMVMASGQEILPQDLPPELLTPSNSHDSSPQAGSGGWQEALTQWIDQRLSEGESDL 421

Query: 419 LDSAVPAFERIMIETALKHTAGRRRDAAVLLGWGRNTLTRKIKELGM 465
           L    PAFE+I++ETALKHT G +++AA  LGWGRNTLTRK+KEL M
Sbjct: 422 LTQIQPAFEKILLETALKHTKGHKQEAAKRLGWGRNTLTRKLKELEM 468