Pairwise Alignments

Query, 629 a.a., thiamine biosynthesis protein ThiC from Pseudomonas fluorescens FW300-N2C3

Subject, 565 a.a., thiamine biosynthesis protein ThiC (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  728 bits (1879), Expect = 0.0
 Identities = 363/587 (61%), Positives = 437/587 (74%), Gaps = 29/587 (4%)

Query: 19  EQSVQPFTRSQKTYVQGSR-PDIRVPMREISLDVTPTDFGGEI-----NAPVVVYDTSGP 72
           EQ ++ F RSQK Y+ G   P+IRV MR++   V    F GE      N  V VYDTSGP
Sbjct: 2   EQKIK-FPRSQKVYLPGKLYPNIRVAMRKVE-QVPSVSFEGEEKIATPNPEVYVYDTSGP 59

Query: 73  YTDPNVIIDVRKGLADVRSSWIEARGDTERLAGLSSNFGQERLADPELTKLRFAHVNNPR 132
           ++DP++ ID++KGL  +R  WI  RGD E+L  ++S +GQ R  D  L  LRF H+  P 
Sbjct: 60  FSDPSMSIDLKKGLPRLREEWIVGRGDVEQLPEITSEYGQMRRDDKSLDHLRFEHIALPY 119

Query: 133 RAKPGANVSQMHYARKGIITAEMEYVAIRENMKLEVARAAGLLDQQHAGHSFGASVPKVI 192
           RAK G  ++QM YA++GIIT EMEYVAIRENM  E                    +   I
Sbjct: 120 RAKKGEAITQMAYAKRGIITPEMEYVAIRENMNCEEL-----------------GIETHI 162

Query: 193 TPEFVRDEIARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALGSSIEEEVAKLTW 252
           TPEFVR EIA G A++PANINH E EPMIIGRNFLVKIN NIGNSA  SSI+EEV K  W
Sbjct: 163 TPEFVRKEIAEGHAVLPANINHPEAEPMIIGRNFLVKINTNIGNSATTSSIDEEVEKALW 222

Query: 253 GIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGVAEDLTWELFRDT 312
             +WG DT+MDLSTG++IHETREWIIRN PVP+GTVPIYQALEKV GV EDL WE++RDT
Sbjct: 223 SCKWGGDTLMDLSTGENIHETREWIIRNCPVPVGTVPIYQALEKVNGVVEDLNWEIYRDT 282

Query: 313 LIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFED 372
           LIEQ EQGVDYFTIHAG+    V +  KR+ GIVSRGGSIM+KWCL H +E+FLY HF+D
Sbjct: 283 LIEQCEQGVDYFTIHAGIRRHNVHLADKRLCGIVSRGGSIMSKWCLVHDQESFLYEHFDD 342

Query: 373 ICEIMKAYDVSFSLGDGLRPGSIADANDEAQFGELETLGELTKIAWKHDVQCMIEGPGHV 432
           IC+I+  YDV+ SLGDGLRPGSI DANDEAQF EL+T+GEL   AW+ +VQ  IEGPGHV
Sbjct: 343 ICDILAQYDVAVSLGDGLRPGSIHDANDEAQFAELDTMGELVLRAWEKNVQAFIEGPGHV 402

Query: 433 PMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTP 492
           PM  IKENM++Q+E C +APFYTLGPL TDIAPGYDHITS IGAA IGW G AMLCYVTP
Sbjct: 403 PMHKIKENMERQIEKCHDAPFYTLGPLVTDIAPGYDHITSAIGAAQIGWLGTAMLCYVTP 462

Query: 493 KEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLD 552
           KEHL LP+K+DV+ G+ITYKIAAHAADLAKGHPGAQ+RDNALSKAR+EFRW+DQF+L LD
Sbjct: 463 KEHLALPDKEDVRVGVITYKIAAHAADLAKGHPGAQVRDNALSKARYEFRWKDQFDLSLD 522

Query: 553 PDTARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQR 599
           P+ A+ Y       D      +C+MCGP FC+M++++++++ A + +
Sbjct: 523 PERAQGYFRAGHHID----GEYCTMCGPNFCAMRLSRDLKKNAKSDK 565