Pairwise Alignments

Query, 712 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

Subject, 620 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  267 bits (682), Expect = 1e-75
 Identities = 156/350 (44%), Positives = 222/350 (63%), Gaps = 5/350 (1%)

Query: 363 MVGLVIAGIGLLVIWLVGHGIARPLKQMVAMLDDIAQGEGDLTRRLVSDRADELGAIARG 422
           ++ LV+ G  L +I      I  P++++   +  I +   DLT R  +   DE+G IAR 
Sbjct: 276 LITLVLIGFTLAII----RSIMEPVQRISDAISRI-EATKDLTLRCDTKVDDEIGQIARH 330

Query: 423 FNTFLSKLQGMITQVVTSVQSVSDSSEHTADIAIRTNQGVHKQMSEIDQVATAVHEMTAT 482
           FN+ +   Q +I +V+TSV+ V+ S +  ++ ++R ++GV +Q++E D VATA+ EM AT
Sbjct: 331 FNSMVESFQSLIREVLTSVEVVNHSCQELSENSMRASEGVGRQLNETDMVATAITEMGAT 390

Query: 483 AQDVARNATQAAQAASHADQAASQGMQIVRDTSTSIGALAVEIGKAVGVVQTLAKDSENI 542
             ++A N   AA+ A +    A QG   V  T   I ALA ++  +  VV  L KDSE I
Sbjct: 391 IDEIASNTELAAERAGNTHDNAQQGQVGVEHTIEKIQALAAQLTDSAQVVSELEKDSETI 450

Query: 543 NAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATEEIQAMI 602
            ++L  IRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +TQ++TEEI  +I
Sbjct: 451 GSVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGII 510

Query: 603 QQLQQGTRDVVRVMEDSQHRTDESVQHAAKAAQALETITQAVSVINDMNTQIASAAEEQS 662
           Q LQ  TR +V++ME +Q +  ES   AA A   LE I   V+ I DM+TQIA+A EEQS
Sbjct: 511 QTLQSRTRSIVQLMEATQRQGIESADQAASAGALLEQINADVTNIMDMSTQIAAAIEEQS 570

Query: 663 AVADDINRNVINIGQVANEVASGADESSAASAGLTKLAEQQRRLINQFRV 712
            VA ++N+NV+ I  +A E A  ADE++ AS  +    +   + ++ F++
Sbjct: 571 MVASEVNKNVVVIRDIAAESAQAADENAKASDDVKARTQVLYQAVSLFKI 620