Pairwise Alignments

Query, 548 a.a., sodium:proton antiporter from Pseudomonas fluorescens FW300-N2C3

Subject, 788 a.a., cyclic nucleotide-binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  125 bits (315), Expect = 5e-33
 Identities = 142/495 (28%), Positives = 225/495 (45%), Gaps = 64/495 (12%)

Query: 46  LHVALDPELFLFLFLPPLLFSDGWRMPKRELWRLRGPILTLAVGLVLFTVVGAGYFIHWL 105
           L + +   +FL++FLP LLF     M  R +     PI+ LAV  V+   +  GY + W 
Sbjct: 17  LGLPIRSNVFLYVFLPTLLFQATLGMNLRRMLDDWVPIMVLAVVAVVVATLSVGYALSW- 75

Query: 106 LPSIPLPVAFALAAVLSPTDAVAVSAIARD-RLPAPLMHMLQGEALMNDASGLVTFKFAL 164
             ++PL     + A++S TD  AV +I R    P  L  +++GE+L+NDA+ +  F   +
Sbjct: 76  ATTLPLAACLLIGAIVSTTDPSAVVSIFRSISAPRRLARIIEGESLLNDAAAIALFGLFM 135

Query: 165 AAAITGVFS--LANASLTFVLVAVGGLLVGVALSWLLGRLRAWMIARGWDDPATHVVFML 222
              + GV +  L++A   F ++  GG L G    WL  R+  W++A         ++  +
Sbjct: 136 GFVMLGVPNPELSDALARFPVLIAGGALTG----WLAARVAIWIMASFHAHELALILVSV 191

Query: 223 LLPFAAYVLAER-LGASGILSAVAAGMM--QSWLDLLPRQTGTRLLNRSVWSLLEFAFNG 279
            LP+ AY+ AE+ +GASG+++ VAAG+    S    LP Q    L  R VW LL      
Sbjct: 192 ALPYLAYIGAEQSIGASGVIAVVAAGLTLNLSGPGRLPPQAWANL--REVWDLLAHWAGA 249

Query: 280 LIFLLLGLQLPDIIKAVTRLETTLWPTLFYRCLDVLAIFLVLLVLRFVWVQSIWRLSGLL 339
           LIF+L  L +P +++ V   +  L   +    +   A+ L  L+     + +I RLS  +
Sbjct: 250 LIFILAALLIPRLLEDVRVSDFILIGVVIVAAIAARAVILFGLLP----LLAILRLSPPV 305

Query: 340 RRWRGQGELTLVPTARSCWLLTFGGVRGAVTLAGVLSVPLLLSAGEAF----PERDLLIF 395
            R          P   +   + +GG+RGAVTLA      L L+  E+F      + L+  
Sbjct: 306 ER----------PYRVA---ILWGGLRGAVTLA------LALAVTESFRVPVEVKRLVGI 346

Query: 396 IAAGVILLSLIAACIALPLLL--RGIEK-SPDDKRRNE---------VREAWRKTAE--A 441
           +A G  L +LI     L  ++   G+++ SP D+  +          VRE   +T E  A
Sbjct: 347 LATGFTLFTLIVQGTTLRSVIGWMGLDRLSPIDEAMSRQVVAVALQTVREDIARTTEDYA 406

Query: 442 AIHALEVEEPPEAGSTSDAAQAALATEVKARLMSEYRHQLDVFNDSAEAQALA-FEMDLL 500
             H +   E    G   +AA          R   +    LD    +    ALA FE D +
Sbjct: 407 LTHDIVRAEAKVFGERLEAA---------VRTAEDSDEILDRDRITLGLIALAGFERDTI 457

Query: 501 ERRLRLKAFRAQRLE 515
             R+R +   A+  E
Sbjct: 458 LARVRERTISARMAE 472