Pairwise Alignments

Query, 548 a.a., sodium:proton antiporter from Pseudomonas fluorescens FW300-N2C3

Subject, 835 a.a., cyclic nucleotide-binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  119 bits (299), Expect = 4e-31
 Identities = 118/423 (27%), Positives = 193/423 (45%), Gaps = 55/423 (13%)

Query: 10  LLMLVGVSRLIGRLIPLPLPLVQ------IGAGAV-------------LAWPSLGLHVAL 50
           L +++G +  +   + LP  ++       IG+GA+             +A   LGL ++ 
Sbjct: 13  LFLVIGAAEPLAARLRLPFTVILAVLGILIGSGAIFFLRTDLTDALNPVAEAILGLPISS 72

Query: 51  DPELFLFLFLPPLLFSDGWRMPKRELWRLRGPILTLAVGLVLFTVVGAGYFIHWLLPSIP 110
           +  +FL++FLP LLF     M  R +     PI+ LAV  V+   +  GY + W   ++P
Sbjct: 73  N--VFLYVFLPTLLFQATLGMNLRRMLDDWVPIMVLAVVAVVVATLSVGYALSW-ASTLP 129

Query: 111 LPVAFALAAVLSPTDAVAVSAIARD-RLPAPLMHMLQGEALMNDASGLVTFKFALAAAIT 169
           L     + A++S TD  AV +I R    P  L  +++GE+L+NDA+ +  F   +   + 
Sbjct: 130 LVACLLIGAIVSTTDPSAVVSIFRSISAPRRLSRIIEGESLLNDAAAIALFGLFMGFVMM 189

Query: 170 GVFS--LANASLTFVLVAVGGLLVGVALSWLLGRLRAWMIARGWDDPATHVVFMLLLPFA 227
           GV    L  A   F ++  GG L G    WL  ++  W++A         +   + LP+ 
Sbjct: 190 GVPDPRLGEALGQFPILIAGGALTG----WLAAQVAVWIMAMFRAHELAMISVSVALPYL 245

Query: 228 AYVLAER-LGASGILSAVAAGMMQSWL--DLLPRQTGTRLLNRSVWSLLEFAFNGLIFLL 284
           AY+ +E+ +GASG+++ VAAG+  +      LP Q    L    VW LL      LIF+L
Sbjct: 246 AYIGSEQVVGASGVIAVVAAGLTLNLTGPGRLPPQAWANL--GEVWDLLAHWAGALIFIL 303

Query: 285 LGLQLPDIIKAVTRLETTLWPTLFYRCLDVLAIFLVLLVLRFVWVQSIWRLSGLLRRWRG 344
             L +P +++ V             R  D + + +V+L         ++ L  LL   R 
Sbjct: 304 AALLIPRLLEGV-------------RLSDFVLLGVVILAALAARAVVLFGLLPLLTLMRV 350

Query: 345 QGELTLVPTARSCWLLTFGGVRGAVTLAGVLSV-PLLLSAGEAFPERDLLIFIAAGVILL 403
              +         W    GG+RGAVTLA  L+V   +   GE    + L+  +A G  L 
Sbjct: 351 SPHVERPYRTAILW----GGLRGAVTLALALAVTESIWVPGEV---KRLVGILATGFTLF 403

Query: 404 SLI 406
           +L+
Sbjct: 404 TLL 406