Pairwise Alignments

Query, 548 a.a., sodium:proton antiporter from Pseudomonas fluorescens FW300-N2C3

Subject, 389 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  100 bits (250), Expect = 8e-26
 Identities = 81/236 (34%), Positives = 121/236 (51%), Gaps = 16/236 (6%)

Query: 63  LLFSDGWRMPKRELWRLRGPILTLAVGLVLFTVVGAGYFIHWLLPSIPLPVAFA----LA 118
           LLF+   ++  + L   +  IL LA    L +    G  ++++ P + LP+A +      
Sbjct: 80  LLFAGALQIRLKILRHQKWEILILAFVSTLLSTFIVGGLLYYIAPMLGLPLALSHCLLFG 139

Query: 119 AVLSPTDAVAVSAIARDR-LPAPLMHMLQGEALMNDASGLVTF-KFALAAAITGVFSLAN 176
           A++SPTD +AV AI +    P  +   ++GE+L ND  GLV F   +  A  T   + + 
Sbjct: 140 ALISPTDPIAVLAILKKMGAPEDIAIQVEGESLFNDGIGLVIFVAISHLAFSTEPLTFSQ 199

Query: 177 ASLTFVLVAVGGLLVGVALSWLLGRLRAWMIARGWDDPATHVVFMLLLPFAAYVLAERLG 236
            SL FV  A+GG++ G  L  LL         R  ++    ++  LL+P A YV+AE LG
Sbjct: 200 ISLLFVQEALGGVVYGAVLGVLLHHF-----FRYCEEETQLMLVTLLIPTAGYVIAEVLG 254

Query: 237 ASGILSAVAAGMM---QSWLDLLPRQTGTRLLNRSVWSLLEFAFNGLIFLLLGLQL 289
            SG L+ V+AGM+    S      R    +L   + WSL+E  FN L+FLLLGL L
Sbjct: 255 VSGPLAMVSAGMIIGNYSVPKYFVRHERVKLY--TFWSLIESFFNALLFLLLGLLL 308