Pairwise Alignments

Query, 302 a.a., sugar ABC transporter permease from Pseudomonas fluorescens FW300-N2C3

Subject, 307 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  114 bits (284), Expect = 4e-30
 Identities = 79/277 (28%), Positives = 141/277 (50%), Gaps = 15/277 (5%)

Query: 19  WL-PKLVLAPSMFIVLVGFYGYILWTFVLSFTTSTFLPNYKWAGLAQYARLMDNDRWWVA 77
           WL P L++ P   +  V      + +  +S           W GL  Y  L+++ +++V+
Sbjct: 11  WLTPTLLILPGAILFAVVILASSVQSLWISLHDWDGFGPMIWIGLGNYRELINDPQFYVS 70

Query: 78  SKNLVLFGGMFIGITLVIGVLLAVFLDQRIRREGFIRTIYLYPMALSMIVTGTAWKWLLN 137
            KN +++  MF+ +   IG+ +A+ ++Q+I+    +      P+ L+ +  G  + W+  
Sbjct: 71  LKNNLIWLVMFM-LAPPIGLAIALLVNQKIKGMRVV-----IPLVLASVAVGVVFTWVYT 124

Query: 138 PGMGLDKLL-RDWGWEGFRLDWLIDPDRVVYCLVIAAVWQASGFIMAMFLAGLRGVDQSI 196
           P  GL  L+ R +G     L  L D   V + +VIAA+W    F M ++LAGL  + + +
Sbjct: 125 PEFGLLALIFRAFGANAPAL--LSDEHLVTFAIVIAALWPQIAFCMVLYLAGLNNLSEEL 182

Query: 197 IRAAQIDGASMPRIYWKVVLPSLRPVFFSAVMILAHIAIKSFDLVAAMTAGGPGYSSDLP 256
           I A ++DGA    +   +VLP L  V F A+ +    A++SFD+++ MT GGP  SS + 
Sbjct: 183 IGAGRVDGARGWNMLRHIVLPQLTQVTFIAIAVTVVGALRSFDMISVMTRGGPFGSSSVL 242

Query: 257 AMFMYSFTFSRGQMGMGSASAILMLGAILAIIVPYLY 293
           A  M+  +    + G G+A     + ++L +I+  LY
Sbjct: 243 AYQMFEQSIFSYRFGYGAA-----IASVLFVIMAVLY 274