Pairwise Alignments

Query, 162 a.a., transcriptional regulator from Pseudomonas fluorescens FW300-N2C3

Subject, 156 a.a., transcription activator effector binding (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 51.2 bits (121), Expect = 8e-12
 Identities = 40/142 (28%), Positives = 58/142 (40%), Gaps = 7/142 (4%)

Query: 26  GARFTQDTAQDIPLLWEKFLPWLGKVPGQKDEVTYGVCCNPDGK----GGFEYIAGVEIS 81
           G R     A+  P  W+   PW+ +         +   C+ D +        Y A V + 
Sbjct: 15  GIRVLGPYAESGPKAWKLLTPWIARRQVTSASTMFLGLCHDDPEITPPERIRYDAMVTVP 74

Query: 82  RLDDLPEQYRWIE-IQPGHYAVFEHKGPLKKLPDTFQYIWKEWLPHSGYEAAGQPEFERY 140
             D  P+ Y  +  I+   YAV  HKGP   LP ++  ++ EWLP SG    G P  E Y
Sbjct: 75  E-DFEPDDYVIVRVIRAREYAVAVHKGPYATLPWSWSALYWEWLPVSGRTPLGAPRMEAY 133

Query: 141 SEDFNPRTGQGTL-EIWIPLKP 161
             D         L  +++PL P
Sbjct: 134 LNDPGATPEDELLTHLYLPLAP 155