Pairwise Alignments

Query, 464 a.a., Fis family transcriptional regulator from Pseudomonas fluorescens FW300-N2C3

Subject, 470 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

 Score =  299 bits (766), Expect = 1e-85
 Identities = 168/384 (43%), Positives = 232/384 (60%), Gaps = 24/384 (6%)

Query: 5   VLLVEDDRALREALADTLVLAGHDYAAVGSAEEALQAVGREAFSLVVSDVNMPGMDGHQL 64
           +L+VED+  +R AL   L    ++ +  GS +EA +      F L+VSD+ +PG  G +L
Sbjct: 4   ILIVEDETIIRSALRRLLERNQYEVSEAGSVQEAQERYSIPGFDLIVSDLRLPGAPGTEL 63

Query: 65  LGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALLDLVAR-------- 116
           + L        PVL+MT++ ++  AVD+M+ GA DY+ KPF+   +L  VAR        
Sbjct: 64  IKLAEGT----PVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQTVARILSDHQQS 119

Query: 117 ---------HALGSLAVEGEGPVAIEPASAQLLELASR---VARSDSTVLISGESGTGKE 164
                     A  + A  G   + I    A + +L  +   VA +DS VLI GESGTGKE
Sbjct: 120 AAVQAQPARSASATAAGSGRDDIGIIGHCAPMQDLFGKIRKVAPTDSNVLIQGESGTGKE 179

Query: 165 VLARYIHQQSRRAGEPFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGT 224
           ++AR +H  SRRA  P I++NCAAIP+ ++E+ LFGHEKG+FTGA A +AG  E ADGGT
Sbjct: 180 LVARALHNLSRRAKAPMISVNCAAIPETLIESELFGHEKGAFTGASAGRAGLVEAADGGT 239

Query: 225 ILLDEISEMPLGLQAKLLRVLQEREVERVGARKPISLDIRVVATTNRDLAGEVAAGRFRE 284
           + LDEI E+PL  QA+LLRVLQE E+ RVG+ +   +D+R++A T+RDL      G+FRE
Sbjct: 240 LFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKTLAKTGQFRE 299

Query: 285 DLYYRLSVFPLAWRPLRERTADILPLAERLLNKHVNKMKHAAARLSAEARACLVAYPWPG 344
           DLYYRL V  L   PLRER +D+L +A+  L +   +M       S +A   +  Y WPG
Sbjct: 300 DLYYRLHVIALKLPPLRERGSDVLEIAKAFLARQGERMGSDDLHFSRDAEQAIRHYSWPG 359

Query: 345 NVRELDNAIQRALILQQGGLIQPE 368
           NVREL+NAI+RA IL +   I  E
Sbjct: 360 NVRELENAIERAAILSESPEIDAE 383