Pairwise Alignments

Query, 464 a.a., Fis family transcriptional regulator from Pseudomonas fluorescens FW300-N2C3

Subject, 477 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  313 bits (801), Expect = 1e-89
 Identities = 196/470 (41%), Positives = 265/470 (56%), Gaps = 31/470 (6%)

Query: 5   VLLVEDDRALREALADTLVLAGHDYAAVGSAEEALQAVGREAFSLVVSDVNMPGMDGHQL 64
           +L+V+DD A R  L   L   G+        E A+  V + A+  V+ DV M  MDG   
Sbjct: 6   ILIVDDDAAHRSMLRTMLRGWGYATEEADDGESAVAKVRQRAWDAVLMDVRMARMDGIAA 65

Query: 65  LGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALLDLVARHALGSLAV 124
           L  +    P  PVL+MTA  +V+ AV+A+R GA DYL+KP +   L   + R AL    +
Sbjct: 66  LRHILDWNPATPVLIMTAFSSVDTAVEALRTGAYDYLIKPLDFDVLRHTLER-ALDHTRL 124

Query: 125 EGEGPVAIEPASAQ---------------------LLELASRVARSDSTVLISGESGTGK 163
             E     E  S+Q                     L+E+ + VA S++TVLI+GESGTGK
Sbjct: 125 ASENRELRERLSSQGGAGAPGASHGIIGRSAPMHELVEMIATVAPSEATVLITGESGTGK 184

Query: 164 EVLARYIHQQSRRAGEPFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGG 223
           E++AR +H  S R+ +P + +NCAA+ + +LE+ LFGHE+G+FTGA   + G+F QADGG
Sbjct: 185 ELVARALHAASHRSAKPLVTVNCAALTETLLESELFGHERGAFTGADRRREGRFVQADGG 244

Query: 224 TILLDEISEMPLGLQAKLLRVLQEREVERVGARKPISLDIRVVATTNRDLAGEVAAGRFR 283
           T+ LDEI EMPL LQAKLLR LQ+ EV+RVG+  P+++D+RV+A TNRDL  E AAGRFR
Sbjct: 245 TLFLDEIGEMPLTLQAKLLRALQQGEVQRVGSDTPLTVDVRVIAATNRDLREEAAAGRFR 304

Query: 284 EDLYYRLSVFPLAWRPLRERTADILPLAERLLNKHVNKMKHAAARLSAEARACLVAYPWP 343
           EDLYYRL+V  +    LRER  D+  LA   L+++  K +      + +A   L+ + WP
Sbjct: 305 EDLYYRLNVIAVHVPALRERAGDVPLLAAFFLDRYTEKNRKHLKGFTPQAMDMLLRHDWP 364

Query: 344 GNVRELDNAIQRALILQQGGLIQ----PEDFCLAGPVACAPLPALAPAPTATPVPPMDVE 399
           GNVREL+NAI+RA+IL  G  +     P  F   G        +           P D +
Sbjct: 365 GNVRELENAIERAVILATGDYVTERELPLHFGGGGSGIAGSGGSAGTGEAGAGNAPADGD 424

Query: 400 G--DSVGALGDDLRRREFQMIIDTLRAERGRRKEAAERLGISPRTLRYKL 447
           G     G   +DL RR    II TLR     + EAA RLGI+  TL  KL
Sbjct: 425 GLAPYAGLSLEDLERR---AIIATLRETADNKSEAARRLGITRATLHNKL 471