Pairwise Alignments

Query, 294 a.a., flagellar motor protein MotD from Pseudomonas fluorescens FW300-N2C3

Subject, 283 a.a., flagellar motor protein from Dechlorosoma suillum PS

 Score =  207 bits (527), Expect = 2e-58
 Identities = 117/285 (41%), Positives = 169/285 (59%), Gaps = 12/285 (4%)

Query: 4   RRHREEHVNHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKVISEALIGVFTDSD--- 60
           ++H +EH N ERWLVSYADFITLLFAFFVVMY+ISSVNEGKY+V+S++LI  F +     
Sbjct: 6   KKHADEHENLERWLVSYADFITLLFAFFVVMYAISSVNEGKYRVLSDSLITAFKNPSIVD 65

Query: 61  -RALKPIPIGEERPKTTTPAKPLVKDSEQVDAGIAGSSDPLKSIADDISAAFGDLISSNQ 119
             A+  +P   +R   +   + +VK+  +V        D ++++A DI A    L+   +
Sbjct: 66  GGAITVVP---KRTPDSVVKQIVVKEDPKVVEAKQQQRDKMRNVAKDIFAVLAPLVQQGK 122

Query: 120 MTVRGNELWVEIELNSSLLFGSGDAMPSDMAFNIIDKVAAILKPFDNPIHVEGFTDDQPI 179
           + V      V IE+N S+LF  G A     +   +  V  +L P D PI +EG TD+ PI
Sbjct: 123 VRVLETARGVTIEINDSILFAPGQAQLEQTSIRAMRAVGEVLAPTDFPITIEGHTDNIPI 182

Query: 180 RTAQYPTNWELSSARSASIVRMLAMQGVNPGRLASVGYGEFQPVANNATAEGRARNRRVV 239
           RTAQ+P+NWELS+ R+ +++R+    GV P  L ++GYGE +PV  N T EGRARNRRV 
Sbjct: 183 RTAQFPSNWELSAVRATTVLRLFVDAGVAPTHLTAIGYGETRPVEMNETVEGRARNRRVS 242

Query: 240 LVVSRNLDVRRSLTG-TGTANATPDAALKRAGTQTAPAPVKSPGR 283
           +++   L  + ++   T  A   P A +  A    +PA + +P R
Sbjct: 243 ILIDSMLPEKPAVVAPTPQAPMAPPAGVPPA----SPAGIATPAR 283