Pairwise Alignments

Query, 294 a.a., flagellar motor protein MotD from Pseudomonas fluorescens FW300-N2C3

Subject, 248 a.a., OmpA/MotB domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 82.0 bits (201), Expect = 1e-20
 Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 61/261 (23%)

Query: 12  NHERWLVSYADFITLLFAFFVVMYSISSVNEGKYKVISEALIGVFTDSDRALKPIPIGEE 71
           +H  WL++ +D   LL A FV+++S+SSV +G +   SE++  V                
Sbjct: 17  DHAIWLITTSDLSLLLLACFVLLFSMSSVEKGTF---SESISSV---------------- 57

Query: 72  RPKTTTPAKPLVKDSEQVDAGIAGSSDPLKSIADDISAAFGDLISSNQMTVRGNELWVEI 131
                           Q   G+   +  ++   +++ +   +++   Q+    N L+ E+
Sbjct: 58  ----------------QQALGVGEGARIVRLKDENVGSVVDEVLYRRQLVEAQNRLFAEV 101

Query: 132 EL------NSSLLFGSGDA------MPSDMAFNI-IDKVAA------------ILKPFDN 166
            L       S +L GS +       MP+ + F    D + A             ++  D 
Sbjct: 102 RLFAQSRGMSDILTGSSEDGKITLNMPAGVLFEPGSDTITAEGRKLLQHMYDLFVRHPDQ 161

Query: 167 PIHVEGFTDDQPIRTA-QYPTNWELSSARSASIVRMLAMQGVNPGRLASVGYGEFQPVAN 225
            I+V GFTD  P  +  ++  NW+LSS+R+ +++R L   G+ P R+ + G  +  P+  
Sbjct: 162 DINVRGFTDSSPTPSGGRFRDNWDLSSSRAINVLRTLLDMGIAPHRITATGLADMNPLFP 221

Query: 226 NATAEGRARNRRVVLVVSRNL 246
           N T E RARNRRV  V+ + L
Sbjct: 222 NTTEENRARNRRVEFVLEKQL 242