Pairwise Alignments

Query, 294 a.a., flagellar motor protein MotD from Pseudomonas fluorescens FW300-N2C3

Subject, 648 a.a., OmpA/MotB domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 78.2 bits (191), Expect = 5e-19
 Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 10/117 (8%)

Query: 134 NSSLLFGSGDAMPSDMAFNIIDKVAAILKP--------FDNPIHVEGFTDDQPIRTA-QY 184
           +SS+LF +G+   S      + KVA IL+          D  + V+G TD+ P+    +Y
Sbjct: 527 SSSVLFDTGEVALSPQGQAEVAKVAGILRSVADRIPEGIDWVLRVDGHTDNVPVTGGGKY 586

Query: 185 PTNWELSSARSASIVRMLAM-QGVNPGRLASVGYGEFQPVANNATAEGRARNRRVVL 240
             NWELS  R+ S+ R L   QG+ P RLA  G+GE+QPV+   T EGRA NRR+ L
Sbjct: 587 ADNWELSQGRALSVARFLIEDQGIPPDRLAPTGFGEYQPVSLEDTPEGRALNRRIEL 643