Pairwise Alignments

Query, 272 a.a., transcriptional regulator from Pseudomonas fluorescens FW300-N2C3

Subject, 270 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  276 bits (706), Expect = 3e-79
 Identities = 139/269 (51%), Positives = 195/269 (72%), Gaps = 2/269 (0%)

Query: 1   MKRSAFFISDGTGITAETLGQSLLAQFENITFAKFIRPYIDSVDKARAMVQQINKAAETD 60
           M R  F+ISDGT ITAE  G ++L+QF  + F     P++++  KA A+ +QIN +  T 
Sbjct: 1   MARKVFYISDGTAITAEVFGHAVLSQFP-MEFEAITIPFVETNAKAEAVKKQINDSFITT 59

Query: 61  GFRPIIFDTIVNQDIREILATSNGFMIDIFSTFLAPLEQELSEHSSYSVGKSHSIGHNSN 120
           G RP++F +IV  +IR+++ +S G   D  +TF+APLEQ+L   ++  + ++H   ++S 
Sbjct: 60  GERPLVFHSIVKPEIRDVIYSSEGLDYDFLNTFVAPLEQQLGVSAAPVLHRTHGKANHS- 118

Query: 121 YMERIEAVNFALDNDDGARTHYYDKADLILVGVSRCGKTPTCLYMAMQFGIRAANYPLTE 180
           Y  RI+A+NFA++NDDG    + DKAD+IL+GVSRCGKTP+ LY++MQFGI+AANYP TE
Sbjct: 119 YEARIDAINFAMENDDGQTLKHMDKADIILLGVSRCGKTPSSLYLSMQFGIKAANYPFTE 178

Query: 181 DDMERLQLPSALRAHQHKLFGLTIDPDRLTAIRNERKPNSRYSSYAQCEFEVREVENLFR 240
           DDM+ L+LP AL+ ++HKLFGLTIDP RL  IR  R  NSRYSS  QC  EV+EVE +F+
Sbjct: 179 DDMDSLKLPEALKRNKHKLFGLTIDPVRLQEIRQSRMENSRYSSLRQCRMEVKEVEMMFK 238

Query: 241 RENIPHINSTHFSVEEISAKILVEKGVER 269
           +E IP+I++T+ SVEEI+ KIL   G+ER
Sbjct: 239 KERIPYIDTTNHSVEEIATKILDMTGMER 267