Pairwise Alignments

Query, 272 a.a., transcriptional regulator from Pseudomonas fluorescens FW300-N2C3

Subject, 270 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  272 bits (695), Expect = 6e-78
 Identities = 140/269 (52%), Positives = 189/269 (70%), Gaps = 2/269 (0%)

Query: 1   MKRSAFFISDGTGITAETLGQSLLAQFENITFAKFIRPYIDSVDKARAMVQQINKAAETD 60
           M    F+ISDGT ITAE  G ++L+QF  + F     P+++++ KA  + +QIN    T 
Sbjct: 1   MAPKVFYISDGTAITAEVFGHAVLSQFP-LEFESLTIPFVETLAKAENVKRQINDCFITT 59

Query: 61  GFRPIIFDTIVNQDIREILATSNGFMIDIFSTFLAPLEQELSEHSSYSVGKSHSIGHNSN 120
           G RP++F +IV  +IR+I+ +S G   D  +TF+APLEQ L   +S  + ++H    N  
Sbjct: 60  GERPLVFHSIVKPEIRDIIYSSEGLDYDFLNTFVAPLEQHLGVSASPVLHRTHGKA-NHG 118

Query: 121 YMERIEAVNFALDNDDGARTHYYDKADLILVGVSRCGKTPTCLYMAMQFGIRAANYPLTE 180
           Y  RI+A+NFA+DNDDG    + D+ADLIL+GVSRCGKTP+ LY++MQFGI+AANYP TE
Sbjct: 119 YEARIDAINFAMDNDDGQTMKHMDQADLILLGVSRCGKTPSSLYLSMQFGIKAANYPFTE 178

Query: 181 DDMERLQLPSALRAHQHKLFGLTIDPDRLTAIRNERKPNSRYSSYAQCEFEVREVENLFR 240
           DDM+ L+LP AL+ ++ KLFGLTIDP RL  IR  R  NSRYSS  QC  EV+EVE +F+
Sbjct: 179 DDMDNLKLPEALKRNKKKLFGLTIDPVRLHEIRQSRMENSRYSSLKQCRLEVKEVEMMFK 238

Query: 241 RENIPHINSTHFSVEEISAKILVEKGVER 269
           RE IP+I++T+ SVEEI+ KIL   G+ER
Sbjct: 239 RERIPYIDTTNHSVEEIATKILDVTGLER 267