Pairwise Alignments

Query, 304 a.a., Ribokinase (EC 2.7.1.15) (from data) from Pseudomonas fluorescens FW300-N2C3

Subject, 305 a.a., PfkB domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  196 bits (498), Expect = 6e-55
 Identities = 123/303 (40%), Positives = 164/303 (54%), Gaps = 3/303 (0%)

Query: 1   MPAKVVVIGSLNMDLVTRAPRLPRGGETLIGESFATIPGGKGANQAVAAARLGAQVSMVG 60
           M   +V++G    D   RA R PR GET++G+SFA  PGGKG+NQA+AAA+ G     + 
Sbjct: 1   MGKPIVILGIFVADCAFRAARPPRMGETVLGDSFALNPGGKGSNQAIAAAKSGGDARFLT 60

Query: 61  CVGDDAYGEQLRGALLAEGIDCQAVRVEQGSSGVALIVVDD-NSQNAIVIVAGANGALTA 119
            +G+DA+ +         G+   A R     +G A I VD     NAI++  GA   L  
Sbjct: 61  RLGEDAFADMAAAIWAEAGVRATAPRDPASYTGAAYIYVDPATGDNAIIVAPGAAALLGP 120

Query: 120 EVLDGVDDVLQSADVIICQLEVPDATVGHALKRGRALGKIVILNPAPASHALPADWYACI 179
             LD   +++  A V + QLE P       L+  RA G   ILNPAPA+  L     A  
Sbjct: 121 ADLDAQAEMIGGAGVFLTQLEQPMPAARRGLEIARAAGVTTILNPAPAA-PLDDALLALC 179

Query: 180 DYLIPNESEAAVLSGLAVDSLETAEAAAAHLIAAGAGKVIVTLGAQGLMFANGASFEHFP 239
           D + PNE+EA  L+G  V   + A  AA  L+A G G VIVTLGAQG+++ +     H P
Sbjct: 180 DIVTPNETEAEALTGHPVTGPDDAVRAADALLARGPGAVIVTLGAQGVLYRSATQTIHQP 239

Query: 240 A-PRVKAVDTTAAGDTFVGGFAAALACGKSEVDAIRFGQVAAALSVTRAGAQPSIPTLLE 298
           A      V+TT AGD F G  A ALA G+    A+RFG   A++SVTR GA PS+P+  E
Sbjct: 240 AFTPGPVVETTGAGDAFNGALATALAEGQDTASALRFGCATASISVTRPGAGPSMPSRAE 299

Query: 299 VQA 301
           + A
Sbjct: 300 IDA 302