Pairwise Alignments

Query, 380 a.a., transporter from Pseudomonas fluorescens FW300-N2E3

Subject, 388 a.a., Spermidine/putrescine ABC transporter ATP-binding subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  417 bits (1073), Expect = e-121
 Identities = 212/358 (59%), Positives = 266/358 (74%), Gaps = 2/358 (0%)

Query: 22  LVRVDRVTKKFDETIAVDDVSLDIHQGEIFAMLGGSGSGKSTLLRMLAGFERPTEGRIYL 81
           ++ ++ V KKF +  AV  VSLD+ +GE   +LGGSG GK+TLLRM+AGFE+PT GRI +
Sbjct: 30  IIEIETVVKKFGDFTAVAGVSLDVFEGEFLCLLGGSGCGKTTLLRMMAGFEQPTSGRILI 89

Query: 82  DGVDITDMPPYERPINMMFQSYALFPHMTVAQNIAFGLKQDRLPASEIEARVEEMLKLVH 141
           DG D+T +PPY+RP+NMMFQSYALFPHM+V QNIAFGLKQD +P +E EARV EML LV 
Sbjct: 90  DGRDMTGVPPYDRPVNMMFQSYALFPHMSVEQNIAFGLKQDGMPKAEREARVAEMLSLVQ 149

Query: 142 MTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIER 201
           + ++AKRKPHQLSGGQRQRVALARSLAK P++LLLDEP+ ALDKKLR + QL+LV I E+
Sbjct: 150 LERFAKRKPHQLSGGQRQRVALARSLAKHPRVLLLDEPLSALDKKLRERTQLDLVNIQEK 209

Query: 202 VGVTCVMVTHDQEEAMTMAQRIAIMHLGWIAQIGSPVDIYEAPVSRMVCEFIGNVNAFDG 261
            G+T V+VTHDQEEAMTMA R+AIM  GWI QI +P  +YE P +R V EF G+VN F+G
Sbjct: 210 TGITFVVVTHDQEEAMTMADRVAIMDEGWIVQIDAPQSMYEYPNTRFVAEFFGSVNMFEG 269

Query: 262 TVVEDLEGHAIIHSPDLEQKIYVGHGVSTSVQDKSITYAIRPEKMLVSTLKPDTRYNWSQ 321
            +VED   H +I +P+LE  IYVGHGVS   +  ++  A+RPEK+ + T KPD  YNW+ 
Sbjct: 270 VLVEDEPDHVMIEAPELENPIYVGHGVS-GHEGATVWAALRPEKVTLVTEKPDRPYNWAA 328

Query: 322 GKVHDIAYLGGHSVFYVELPGGKIVQSFMANAERR-GTRPTWDDQVYVWWEDDSGVVL 378
           G+V DI YLG  S + V L  GK ++  +AN ER      TW D+VYV W   S VV+
Sbjct: 329 GEVKDIVYLGSTSTYIVGLDTGKRMRVTVANHERDVEWEITWGDRVYVSWAATSAVVV 386