Pairwise Alignments

Query, 380 a.a., transporter from Pseudomonas fluorescens FW300-N2E3

Subject, 378 a.a., spermidine/putrescine ABC transporter ATPase subunit (RefSeq) from Shewanella loihica PV-4

 Score =  525 bits (1351), Expect = e-153
 Identities = 263/380 (69%), Positives = 314/380 (82%), Gaps = 2/380 (0%)

Query: 1   MANASSIYRKALEGNQQPKKVLVRVDRVTKKFDETIAVDDVSLDIHQGEIFAMLGGSGSG 60
           MA+ S +  K     Q   +VL++++RV+K FD+  AVDDVSL+I++GEIFA+LGGSGSG
Sbjct: 1   MASNSGVTNKPTTKTQG--EVLLKIERVSKLFDDVRAVDDVSLNINRGEIFALLGGSGSG 58

Query: 61  KSTLLRMLAGFERPTEGRIYLDGVDITDMPPYERPINMMFQSYALFPHMTVAQNIAFGLK 120
           KSTLLRMLAGFE+PTEGRIYLDG DITDMPPYERPINMMFQSYALFPHMTVAQNIAFGLK
Sbjct: 59  KSTLLRMLAGFEKPTEGRIYLDGQDITDMPPYERPINMMFQSYALFPHMTVAQNIAFGLK 118

Query: 121 QDRLPASEIEARVEEMLKLVHMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPM 180
           QD++P +EIE RV+EMLKLVHM  YAKRKP+QLSGGQRQRVALARSLAKRPKLLLLDEPM
Sbjct: 119 QDKMPKAEIEQRVKEMLKLVHMEPYAKRKPNQLSGGQRQRVALARSLAKRPKLLLLDEPM 178

Query: 181 GALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMTMAQRIAIMHLGWIAQIGSPVDI 240
           GALDKKLR+QMQLE+V+I+E VGVTCVMVTHDQEEAMTMA+RIAIM+ GWIAQ GSP+DI
Sbjct: 179 GALDKKLRTQMQLEVVDILEAVGVTCVMVTHDQEEAMTMAERIAIMNDGWIAQTGSPMDI 238

Query: 241 YEAPVSRMVCEFIGNVNAFDGTVVEDLEGHAIIHSPDLEQKIYVGHGVSTSVQDKSITYA 300
           YE+P +RMV EFIG+VN F+G +VED   H +I+  ++ Q  YVG+GVSTSV    +  A
Sbjct: 239 YESPANRMVAEFIGSVNLFEGDIVEDEVDHVVINVANIPQPFYVGYGVSTSVDTTQVWVA 298

Query: 301 IRPEKMLVSTLKPDTRYNWSQGKVHDIAYLGGHSVFYVELPGGKIVQSFMANAERRGTRP 360
           IRPEK  +S  +P+   NW  GKV DIAYLGG SV+Y+ L  G+++QS M N++RR   P
Sbjct: 299 IRPEKTHISREQPEDARNWCAGKVEDIAYLGGISVYYIRLCNGQLIQSVMTNSDRRADSP 358

Query: 361 TWDDQVYVWWEDDSGVVLRA 380
           TW++ V+V WE  S VVLR+
Sbjct: 359 TWEEDVFVSWEATSAVVLRS 378