Pairwise Alignments

Query, 380 a.a., transporter from Pseudomonas fluorescens FW300-N2E3

Subject, 378 a.a., polyamine ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  541 bits (1393), Expect = e-158
 Identities = 270/380 (71%), Positives = 315/380 (82%), Gaps = 2/380 (0%)

Query: 1   MANASSIYRKALEGNQQPKKVLVRVDRVTKKFDETIAVDDVSLDIHQGEIFAMLGGSGSG 60
           MA+ S +  K     Q+  KVL++++RV+K FD+  AVDDVSL I++GEIFA+LGGSGSG
Sbjct: 1   MASTSGVTNKPTTKTQE--KVLLKIERVSKLFDDVRAVDDVSLTINKGEIFALLGGSGSG 58

Query: 61  KSTLLRMLAGFERPTEGRIYLDGVDITDMPPYERPINMMFQSYALFPHMTVAQNIAFGLK 120
           KSTLLRMLAGFERPT GRIYLDG DITD+PPYERPINMMFQSYALFPHMTVAQNIAFGLK
Sbjct: 59  KSTLLRMLAGFERPTSGRIYLDGEDITDLPPYERPINMMFQSYALFPHMTVAQNIAFGLK 118

Query: 121 QDRLPASEIEARVEEMLKLVHMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPM 180
           QD+LP +EIE RV+EMLKLVHM QY KRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPM
Sbjct: 119 QDKLPKAEIEQRVQEMLKLVHMEQYGKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPM 178

Query: 181 GALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMTMAQRIAIMHLGWIAQIGSPVDI 240
           GALDKKLR+QMQLE+VEI+ERVGVTCVMVTHDQEEAMTMA RI+IM  GWIAQ GSP+DI
Sbjct: 179 GALDKKLRTQMQLEVVEILERVGVTCVMVTHDQEEAMTMAGRISIMSDGWIAQTGSPMDI 238

Query: 241 YEAPVSRMVCEFIGNVNAFDGTVVEDLEGHAIIHSPDLEQKIYVGHGVSTSVQDKSITYA 300
           YE+P SRM+ EFIG+VN F G +  D   H II   DL +  YVG+GV+TS++DK +  A
Sbjct: 239 YESPNSRMIAEFIGSVNLFSGEIEVDEVDHLIIKPNDLARSFYVGYGVTTSLEDKRVWLA 298

Query: 301 IRPEKMLVSTLKPDTRYNWSQGKVHDIAYLGGHSVFYVELPGGKIVQSFMANAERRGTRP 360
           +RPEK ++S  +P+  YNW++G VHDIAYLGG SV+Y+ L  G+IVQ  M N ERR    
Sbjct: 299 VRPEKTIISREQPEGEYNWAKGIVHDIAYLGGISVYYIRLENGQIVQCSMTNRERRADHA 358

Query: 361 TWDDQVYVWWEDDSGVVLRA 380
           TWDD+V++ WED SGVVLR+
Sbjct: 359 TWDDEVFISWEDTSGVVLRS 378