Pairwise Alignments

Query, 270 a.a., exonuclease III from Pseudomonas fluorescens FW300-N2E3

Subject, 263 a.a., exodeoxyribonuclease III protein from Sinorhizobium meliloti 1021

 Score =  153 bits (387), Expect = 3e-42
 Identities = 95/270 (35%), Positives = 143/270 (52%), Gaps = 11/270 (4%)

Query: 1   MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVDDVQFPLAELEALGYHVGFHGQK 60
           MKI ++NING++AR   L   + +  PD+  LQE K  D  FP  E+EALGYHV  HGQK
Sbjct: 1   MKIATWNINGVKARLDGLVGWLRESNPDIACLQEIKSVDETFPRGEIEALGYHVETHGQK 60

Query: 61  GHYGVALMSRQAPLALHKGFASDEEDAQRRFIWGTFADANGVPVTIMNGYFPQGESRDHP 120
           G  GVAL+S+  P  +++G   D  D Q RFI G F+  NG  + +   Y P G   +  
Sbjct: 61  GFNGVALLSKVRPDEINRGLPGDPADEQSRFIEGVFS-VNGGALRVCCLYLPNGNPVE-T 118

Query: 121 TKFPAKERFYNDLQTLLETQFSNDQPLVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCSF 180
            K+P K  +   L    E +   ++PL++ GD N+ PE  D      ++K W       +
Sbjct: 119 EKYPYKLAWMRRLAAFAEQRLVLEEPLILAGDYNVIPEAHDCW----DVKVW--RNDALY 172

Query: 181 LPEEREWMARLKNWGLVDSFRHLNPDVTDRFSWFDYRSRGFEDEPKRGLRIDLILASQGL 240
           LPE R    RL+N G  D+ R    D    +S++DY++  +  +   G+RID ++ S   
Sbjct: 173 LPETRAAFRRLRNLGFTDAVR-ATSDEAPLYSFWDYQAGCW--QKNFGIRIDHLMLSPEA 229

Query: 241 LPRVKAAGVDYELRGMEKPSDHAPIWLELS 270
             ++ +  ++  +R  EKPSDH P+  E +
Sbjct: 230 ADKLVSTSIEKHVRAWEKPSDHVPVTAEFA 259