Pairwise Alignments

Query, 270 a.a., exonuclease III from Pseudomonas fluorescens FW300-N2E3

Subject, 264 a.a., exodeoxyribonuclease III protein from Sinorhizobium meliloti 1021

 Score =  141 bits (355), Expect = 2e-38
 Identities = 95/271 (35%), Positives = 139/271 (51%), Gaps = 16/271 (5%)

Query: 1   MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVDDVQFPLAELEALGYHVGFHGQK 60
           MKI ++N+NG+  R   L   +E+  PDV+ LQE K  D +FP+  +EA GY   +HGQK
Sbjct: 1   MKIATYNVNGVNGRLGVLLRWLEEASPDVVCLQELKAPDPKFPVKAIEAAGYGAIWHGQK 60

Query: 61  GHYGVALMSR-QAPLALHKGFASDEEDAQRRFIWGTFADANGVPVTIMNGYFPQGESRDH 119
              GVA+++R + P    KG   D +D   R+I    A   G+ +  +  Y P G     
Sbjct: 61  SWNGVAILARDREPTLTRKGLPGDPDDTHSRYI---EAAVEGMVIGCL--YLPNGNPYPG 115

Query: 120 PTKFPAKERFYNDLQTLLETQFSNDQPLVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCS 179
           P KF  K  +++ L          D P+++ GD N+ P + D+       +RW+      
Sbjct: 116 P-KFEYKLAWFHRLTAYAAELLELDVPVILAGDYNVMPTELDV----YKPERWV--NDAL 168

Query: 180 FLPEEREWMARLKNWGLVDSFRHLNPDVTDRFSWFDYRSRGFEDEPKRGLRIDLILASQG 239
           F  E R+   RL   G  D+ R L+P     ++++DY    F  +   GLRID +L S  
Sbjct: 169 FRIEVRDAYHRLLEQGWTDALRQLHPG-ERVYTFWDYFRNAFARD--AGLRIDHLLLSPH 225

Query: 240 LLPRVKAAGVDYELRGMEKPSDHAPIWLELS 270
           +  R+ AAGVD  +RG E  SDHAP W+ELS
Sbjct: 226 VTLRLSAAGVDRHVRGWEHTSDHAPAWIELS 256