Pairwise Alignments

Query, 270 a.a., exonuclease III from Pseudomonas fluorescens FW300-N2E3

Subject, 269 a.a., exonuclease III (RefSeq) from Shewanella loihica PV-4

 Score =  357 bits (915), Expect = e-103
 Identities = 166/266 (62%), Positives = 208/266 (78%), Gaps = 2/266 (0%)

Query: 1   MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVDDVQFPLAELEALGYHVGFHGQK 60
           MKIVSFNINGLRAR HQL ALI+ H PD+IGLQETKV D  FPLAE+EA+GY V +HG K
Sbjct: 1   MKIVSFNINGLRARLHQLQALIDSHSPDIIGLQETKVHDEAFPLAEVEAMGYQVHYHGGK 60

Query: 61  GHYGVALMSRQAPLALHKGFASDEEDAQRRFIWGTFADANGVPVTIMNGYFPQGESRDHP 120
            HYGVA++S+  P+ + KGF +D+++AQRR I GTF  ANG  +T++NGYFPQGE+  H 
Sbjct: 61  AHYGVAMLSKLPPVKVQKGFPTDDDEAQRRMIMGTFTQANGRQLTVLNGYFPQGENISHE 120

Query: 121 TKFPAKERFYNDLQTLLETQFSNDQPLVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCSF 180
           TK+PAK +FY DL   L+   S D+ + ++GD+NISP D DIGIG  N KRWLKTGKCSF
Sbjct: 121 TKYPAKRKFYQDLMHYLQQHHSPDEDIAIIGDINISPIDLDIGIGEVNAKRWLKTGKCSF 180

Query: 181 LPEEREWMARLKNWGLVDSFRHLNPDVTDRFSWFDYRSRGFEDEPKRGLRIDLILASQGL 240
            PEEREW+  L +WGLVD+FR L+P  ++R+SWFDYRS+GF+D   RGLRID+ILA+  L
Sbjct: 181 QPEEREWLQTLLDWGLVDTFRQLHPTRSERYSWFDYRSKGFDD--NRGLRIDVILATPSL 238

Query: 241 LPRVKAAGVDYELRGMEKPSDHAPIW 266
             R+  + VDY+LRG++KPSDHAPIW
Sbjct: 239 AERLTESDVDYDLRGIDKPSDHAPIW 264