Pairwise Alignments

Query, 302 a.a., LysR family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

Subject, 303 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  173 bits (438), Expect = 5e-48
 Identities = 103/297 (34%), Positives = 162/297 (54%), Gaps = 4/297 (1%)

Query: 1   MQDLNDLYYFAKVVEAGGFAAAGRVLGIPKSRLSRRIAELEERLGARLLQRTTRQLKLTA 60
           M DLN +  FA VV A GF+ A R  G+PKS +SR++A+LEE+LG RLLQR TR L LT 
Sbjct: 1   MPDLNGMMLFAAVVRAKGFSQAARNTGMPKSTISRKVAQLEEQLGVRLLQRDTRNLSLTQ 60

Query: 61  VGERYLRHCQAMLLEAEMADEAVASMSSEPRGRLRVSCPVGLAHEFLPSVISTFLERFPQ 120
           VG  + +HC ++  E E A   + +  ++  G LR++ PV  + E + S+ S+F+  +P 
Sbjct: 61  VGALFYQHCSSISDEIEAAKATIENTHNDVFGSLRIAIPVSFSQELIASLCSSFMRLYPN 120

Query: 121 VQLEMQLLNRRVDLVTEGIDVALRVRDLGDEDPLLVTRRLRQAQMVMIASPAFIREHPI- 179
           V L++Q  +  V LV EG D+A++   L   D  LV R L + Q +++ASP +++ +   
Sbjct: 121 VDLDVQFTDSDVGLVGEGYDIAIKYGPLQSSD--LVARLLFERQPILVASPGYLKANGTP 178

Query: 180 NSPEDLKQVPVLGALEADRMVHVRMLDAQGTTCDLTLEARLGIDDFIVRKACTLAGLGFT 239
            +P+DLK+   +  L   R   +  L        +  + ++ ++  I+ K   L   G  
Sbjct: 179 ATPQDLKEHSGI-LLGTSRSAPIWPLGKGERKTMVNFKRKVRVNSAIMVKQLVLDDFGIA 237

Query: 240 LLPMMYCEEELENGSLVQLLPEWSLPGGWLLAVYPHRRGLLPAVRAWIDHLTESFKA 296
           +L    C+ EL  GSLV LL EW +    +  VY  RR L   +  ++D  T+ F +
Sbjct: 238 MLSNSVCKNELAGGSLVPLLQEWPMEPFKVYGVYSSRRQLATNISVFLDFFTKRFNS 294